Corynebacterium geronticis: CGERO_08845
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Entry
CGERO_08845 CDS
T06788
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cgk
Corynebacterium geronticis
Pathway
cgk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGERO_08845 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgk03021
]
CGERO_08845 (rpoA)
03400 DNA repair and recombination proteins [BR:
cgk03400
]
CGERO_08845 (rpoA)
Enzymes [BR:
cgk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGERO_08845 (rpoA)
Transcription machinery [BR:
cgk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGERO_08845 (rpoA)
DNA repair and recombination proteins [BR:
cgk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGERO_08845 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AZA12060
UniProt:
A0A3G6J6J1
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All DBs
Position
complement(1875993..1877009)
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTLTEEYVDSARSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVL
HEFTTINGVKEDVSDIILNIKGLVLSSDSDEPVVMYLRAEGPGEVTAGTIEPPAGVEIHN
PDLHIASLNEQGSLEIEMIVERGRGYVPATLYSGSAEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLIIDVETKNSMAPRDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EYIAAYSTPIEDLNFSVRSYNCLKRQDIHTVGELAECTESDLLDIRNFGQKSINEVKIKL
SGLGLTLKDAPEDFDPTQLEGYDAATGDYVDTDPEDSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcaacgccctactctcaccgaagagtatgtggattccgctcgttcgcgc
ttcatcattgagccgctcgagccgggcttcggctacaccctcggcaactcgctgcgtcgc
accctgctgtcctccattcctggtgctgctgtcaccagcgtgaagatcgacggcgtgctg
cacgagttcaccaccattaacggtgtcaaggaagatgtctctgacatcatcctgaacatc
aagggtctggtgctgtcttccgactccgatgagccggtcgtcatgtacctgcgcgccgaa
ggcccgggcgaggtaaccgctggcaccattgagccgcccgccggtgttgagatccacaat
cctgatcttcacatcgcttccctcaatgagcagggcagccttgaaatcgagatgattgtt
gagcgtggccgcggctacgtccccgcgaccctgtactcaggttccgctgaaatcggccgt
atcccggtggatcagatttactcgccagtgctgaaggtgagctacaaagtggaagctact
cgtgttgagcagcgcaccgactttgacaagctcatcatcgacgtagagaccaagaactcc
atggctccccgcgacgccctggcgtcggcaggcaagactctggttgagctctttggcctt
gctcgcgagctcaacaccgccgcggagggtatcgagatcggcccctccccacaggagacc
gagtacattgccgcctacagcaccccgatcgaggacctgaacttctccgttcggtcctac
aactgcctgaagcgccaggacatccacaccgtcggtgaactcgcagagtgcaccgagtcg
gatttgctggacatccgcaacttcggccagaagtcgatcaacgaggtcaagatcaagctt
tccggtttgggactgaccttgaaggacgctcctgaggacttcgatcccacgcagctcgag
ggctacgacgccgccaccggcgactacgtggacacggatccggaagattccgagtaa
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