Cotesia glomerata: 123260604
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Entry
123260604 CDS
T07738
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cglo
Cotesia glomerata
Pathway
cglo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123260604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cglo03019
]
123260604
Messenger RNA biogenesis [BR:
cglo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123260604
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123260604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
HTH_upst_double_PIN
Utp14
Motif
Other DBs
NCBI-GeneID:
123260604
NCBI-ProteinID:
XP_044577724
LinkDB
All DBs
Position
LG3:28318736..28330001
Genome browser
AA seq
2499 aa
AA seq
DB search
MNLDSLSFTLTQINYLIVNLNKKNYRDSTEEISILVRWKGLEADRHLLRCLFSHIDFSTG
ETPNTSSKDYYQVQLLKQECTNILGKPSLVSNLCYAIDHPLHHQKTLKPSLKFFLHLRRL
LSLTLVQEIVFAIALQHSENAELRSLALEEVKKQLPDLINNYIQSADSTGNKQQEDGLHD
SSPEVLHLILIETLKDQNSYGLSLETKEKFLKNLKRDFPRELVPVVLAPLLYPGDGEITH
VPNELDMATNQMDANSLVELIMELGYGFTNNVEDCRAALTGLGAREISPLAAARVLAHMA
RTYSGLDDAGGLQSFWSISSNNADGNKDKSDGNPSSTWNVEVFVQTLKEIQSTLSWNEVI
VKLDHPDFHIKNRQSLNLLITGLRLGLQLQGFPLDVFPVELFYRHWDNVEGQFSLIQQIL
KNPDVFCFADYPYHSVTVDVLKAAPEGDSKEAQTWRSLNVVELLLHMAERGLNGPVQDIF
KWPIQHCPDVLVLALLQINPPITMLRQELLSTLMPIFLGNHPNSAVILHHAWHANNLKIK
SIIMHAMADWYLRGDNDQTRLSRILDVAQDLKALSALLKAQSFPFVIDLACLASRREYLK
LEKWLGDKIRDHGEIFIAACVKFLQRRCPQVMGPGIKEDTTIPKASQLPQETLTTILMVL
QPCTASLSQELADTIITMIGNCSMMLKTNLNRPPPPGVMRHPALDVFNPVKLAAPLFPTK
PIDTLGNLSTNLASMGIGSGLGPPSTSAFNLPGALGPLVSAPGSPSRLMGPSPNPFPMMP
MSSQIHSGPVGTQSTAVIPGAASIGGNGRLGPPANIEKTRIPEISNLFPDMPQIVSKDIE
DEANSYFMGIYNHSPHQTLSIDEVLDILKKFQNSTIKREHDVFQCILRNLLEEYRFFPQY
PEKELHITAQLFGGIIDRGLVNNYMTLGIALRFVLDALRKPEGSKMYFFGLAALDRFKSR
LKEYSTYCEHVRAIHHFLEFPSHLVEYIEFGLSGQEPPHKPQGPIYPKSHPLMMNQATTA
YKSITTTTATSNTQSKPSTTPTTSMSARPSIANATNIDTLLVATDKEEMKITIPPETMQD
KTAFIFNNLSQINLQAKCDEIREIVTEEFWPWIAQYLVMKRASIELNFHVLYSNFLDYLK
VPEVNRLVTRETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDIDL
KSLLVEAYNKGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMSIMNVLAELHQEPDLKL
NLKFEIEVLCKNLSIDVSELKPAIYLKDPEKIRSIEYQLSQPNKKSEASHSAQQQQQQQQ
HQQQQQQQQQQQQQQQQAQQQAQQQAQQQQQQQQQQQQQQAQQQAQQQQQQQQQQQAQQQ
QQQQQQQQQQQQQQLAQQQSQQQQQQQQSSQQNTMEELVGSSAPGVISQPQPANTTPSLP
TGPPEPRFNYMDINVSNVANVAQHITVNNQLPLLQASPHLKQFIRPSIERAIQEWIHPVV
DRSIKIALTTSEQIARKDFALDPDETRMRQAARHMVRNLVAGMAMITCRDQILASISTNL
KQAFLAALMGSTQQQKDLVEQAANVLAGDNMELACAFVQKTAIEKAMPEMDKRLLNEIEL
RKIARQEGRRYFDPVAKYQAERMPEQIRLKAGGVTPQQMAVYEEFARNIPGFLPLSERET
QALFIPKPISEPTAVTAFASNPAVTLPTQQVAVYANAAVNNDEVGTMLEKLASEVELLLT
STAAPPQQLTGLHALLESIILTRRSRDAGAAMALLKRAVDGLLESPSASSSTIESELILR
YRELHLRILKCLQDPRAYGLQWTNKNVARVWADSREECRFNFEAVDCLIRSHLISLPQLD
GALAQAMEGGIAMAVAFAMQLVQVYLIDERQTTHVNESDLYNLLESLARMAHHRATPDGI
SVFRLTSVMESLRANHESGVLADRSSVGPTAHIHSGISQVRARDFDDPPGLMEKTEYLLR
EWVTMHHSPNNSRDPTKAFGLFVHQMNIHGILKTDDLITRFFKLSTQMCVDLCYRALAES
NLAVSAVRAKCFLTLDAFVKLVALLVKHSGDTSNTHTKINLLNKVLGIVAGVLLQDHEMR
GTDFQQLPYHRIFIMLFLELCAPEPVLEAVNYQVLTAFCHTLHILRPAKASGFCYAWLEL
VSHRVFIGRMLAITPQQKCWGMYAQLLIDLFRYLAPYLRNAELAKPVLFLYKGTLRVLLV
LLHDFPEFLCDYHYGFCDAIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLQEIAHA
PRVLTNFASIIQPLSFKKELDSYLKARAPVTFLSELRSNLQVSQEAGMRYNIPLMNALVL
YVGTQAIAFIRNKGHTPNMSTIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSH
THYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWTH
EFVHCAPEIEKLFESVARSCMVQKQVLSTQSTQEPELPE
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttatcttttactttaacacaaataaattatttaattgtaaattta
aataagaaaaattatcgcgatagtaccgaggaaatatcaatcttagtacggtggaaaggt
ctagaggcagacagacatttgttgcgctgtttgttctcgcacattgacttttctacagga
gaaacgccaaacactagctccaaggattattatcaagttcaattgctcaaacaagagtgt
acaaatattcttggaaaaccttcgttggtctcaaatctctgttacgctattgaccatcct
ctccatcatcaaaagactttgaaaccatcgctgaaattttttcttcacttacgacgacta
ctgagcttaactctcgtccaagaaattgtttttgcaattgcattgcagcactcagaaaac
gccgagttgagatcattggcacttgaggaagttaaaaaacaacttccagacttgataaat
aattacatacagtcagcagacagtactggcaacaagcagcaggaggacgggctccacgat
tcctcgccggaagtattacatttgatactcattgaaacattgaaagatcaaaattcttac
gggctctcgttggagactaaagaaaaatttttgaaaaatttgaaacgtgattttccccgt
gaactggtaccagtggtgctagcaccactattatatccaggagacggggaaattactcac
gtacctaacgaactcgatatggccaccaatcaaatggacgccaactcgttagtcgagttg
ataatggaattaggctatggatttaccaacaatgtagaagactgtcgcgcagccttaact
ggcttgggagcgcgagaaatatctccattggctgcagcacgcgtcctggctcacatggca
agaacgtacagtgggttagacgatgctggtggcttacagtcattttggagtatttcatcg
aacaatgctgacggtaacaaagataaatcagacggtaatccatcaagtacatggaatgtt
gaagtatttgtacagacgttaaaagaaattcagtcaacattatcatggaatgaagtgatt
gttaaattagatcatcccgattttcacattaaaaatcgccaaagtttgaatcttttgata
actggtttaagacttggattacaattacaaggttttccattggatgtatttccagttgag
ttattttatcgtcattgggacaatgtcgagggacaattttctttgattcagcaaattttg
aaaaatcccgatgtattttgcttcgctgattatccctatcattcggtgacagttgatgta
ctaaaagctgcaccggaaggtgacagcaaagaagcccaaacttggcgatcactaaatgta
gtagagcttttacttcatatggctgaacgtggactcaatggacctgtacaagatatattt
aaatggccgatccaacactgtccggatgtacttgtattagcgttactccaaattaaccca
ccgattacaatgttacggcaagaattgctgagcactttaatgccaatatttttaggcaat
cacccgaattcggcagttattttacaccacgcttggcatgccaataatttaaaaataaag
tcgataataatgcacgcaatggctgactggtatttacgcggtgataatgatcagacaaga
ttatcacgaattttagacgtagctcaagatttaaaagctttatcagcattattaaaggca
caaagttttccatttgtaatcgatcttgcttgtttggcatcacgacgagagtacttgaaa
ctggaaaagtggctcggagacaaaatacgtgaccacggtgaaatattcatcgcggcatgt
gttaaatttttacaacgaagatgcccacaagtaatgggaccgggtattaaagaagacaca
accatccccaaggccagtcaactgcctcaagaaactttgacaactattctaatggtcctg
caaccttgcactgcaagtctctcacaagaactagcagataccataattacgatgatcgga
aactgcagtatgatgttgaagactaatttaaacagaccaccgcctccaggagtgatgcgt
catcccgcattagacgtatttaatccagttaaattggcagctcctttgtttccaacaaaa
cctattgacactctgggtaatttgagcactaatttagcttcaatgggtatcggatctggc
ttaggaccgccgagtacctcagcttttaatttacccggtgctttaggtcctttggtatct
gcaccaggatctccctcgaggctaatgggtccgtcgccaaatccttttccaatgatgcca
atgtcttcgcaaattcattctggaccagttggtactcagagcactgctgtgatacccggt
gctgcgtcaataggcggtaatggacgtttaggcccgccggcgaatattgaaaagactaga
atacctgaaatatcaaatttattccctgatatgccacaaatagtgtctaaagacattgaa
gatgaagctaatagttattttatgggtatttacaatcattcacctcatcagactttgtca
attgatgaggtgcttgatatattaaaaaaatttcagaattctactataaaacgcgagcat
gatgtgtttcagtgtatattacgtaatttattggaagaatatcgtttctttccgcagtat
cctgaaaaggaacttcatatcactgctcaattattcggcgggattattgatcgtggattg
gtaaataattacatgaccctgggaatagcgcttaggtttgttttagatgctctgagaaaa
ccagaaggcagtaaaatgtatttctttggtttagcagctcttgacagattcaaaagccgt
ttaaaagaatattcgacttattgcgaacatgtaagagctattcatcattttcttgagttt
ccatcgcatttagtcgagtacattgagtttggactgagcgggcaagagccgcctcataaa
cctcagggacctatttacccaaaatcacatcctcttatgatgaaccaggctaccactgct
tacaaatccataactacaacgaccgctacgagcaacacgcagtcaaaaccatctactacg
ccaacaacttcgatgtctgctcggccttctattgcaaatgcaaccaatatcgatacactg
cttgtagctactgataaagaagaaatgaaaattacaataccgccagaaaccatgcaagac
aaaacggcattcatttttaataatttgagtcagattaatttacaagctaagtgtgatgaa
atacgtgaaattgttactgaagaattctggccttggattgctcagtacttggtaatgaaa
cgtgcgagtattgaattgaattttcatgtactgtattcaaattttctggattatcttaaa
gtaccagaagttaacagattagtaacgagagagacttttaggaatattaaagttttatta
cgcagtgataaaggtattgcaaatttttctgaccgttctttgctaaaaaatctcggacat
tggctcggtatgctaacacttggaagaaataagccaattctacaagttgacattgattta
aaaagcttattagtagaagcgtataataaaggtcagcaagaattgttgtacgtcgtgccc
ttcgtagctaaagttttagaaagctgtgccaagagtcgtgtttttcggccaccaaaccct
tggaccatgtctataatgaatgtcctcgctgagttacaccaagagccagatttgaagctg
aatctcaaatttgaaatcgaggttttgtgtaaaaatcttagtattgatgtttcggagttg
aaacctgcgatttatttaaaggatcctgagaagataaggagtattgagtaccaactgtcc
caacctaataaaaaatctgaggcgtctcattctgctcaacaacagcagcaacaacagcaa
catcagcagcaacagcaacagcaacagcaacaacaacaacagcaacagcaggctcaacaa
caagcacaacaacaagcccagcaacaacaacagcagcagcagcaacaacaacaacaacaa
gcacaacaacaagcccagcaacaacaacagcagcaacaacaacaacaagcacagcagcag
caacaacaacaacaacagcagcaacaacaacagcagcagcaattggctcaacaacagtca
caacagcagcagcaacaacaacagtcgtctcaacaaaatacaatggaagaattagtcgga
tcttcagcacctggtgttatttctcagcctcagccggctaataccactccatctcttccc
accggtcctccagagccccgatttaattacatggacatcaatgtatccaatgtagccaat
gttgctcaacatataactgtaaacaaccagcttccgcttttgcaagcgagtccacacttg
aaacaattcatccggccatctatcgagcgtgcaattcaagaatggattcatcctgttgta
gatcgttctattaaaatagctcttaccaccagtgaacagattgctagaaaagatttcgca
ttagatcctgatgaaaccaggatgcgtcaagcagcgcgtcacatggtacggaatttagtc
gctgggatggcaatgattacttgccgagatcaaatattggcgtctattagcactaacttg
aagcaggcatttttggcagcactgatgggctctacgcaacagcaaaaagatcttgtagaa
caggcagctaatgtccttgctggtgacaatatggaattggcgtgtgctttcgtccaaaag
acggctattgaaaaagcaatgccggaaatggacaaacggctgttgaatgaaattgagctc
agaaaaatagctcgtcaagagggacgtcggtactttgatcctgtggctaaataccaagcc
gagcgtatgccggaacaaattcgcttgaaagccggaggagtaactcctcaacaaatggct
gtctatgaagaatttgcaagaaatattcccggatttttgccgctgtctgagcgtgaaaca
caagctctgtttatacccaagccgataagcgagccgacagcagtgacagctttcgcttca
aaccccgctgtaacattaccaacacaacaagtcgctgtgtatgcaaacgcagctgtaaac
aacgacgaagttggtacaatgctagagaagcttgccagtgaagttgaattacttctcacg
agtacagctgccccgccacagcaactcacaggcctccacgcgcttctggagtctataatc
ctcaccagaaggtctcgtgacgccggtgctgcaatggctctcttaaaaagagctgttgat
ggacttttagagagcccatcagcttcaagcagtaccatagaatcggaattaattctccgt
tatcgtgaattgcatcttagaattctaaaatgcctccaagacccacgtgcttacggctta
caatggacgaacaaaaatgtagcacgtgtatgggccgacagcagagaagagtgtcgtttt
aactttgaagccgttgactgtctcatcaggtcacacttgataagccttcctcaactcgac
ggagcactggctcaggctatggaaggaggcattgcaatggccgtagccttcgccatgcag
ctagtccaggtctacttgatcgacgaaagacaaaccacccacgtaaatgaatctgacttg
tacaacctccttgaatctttagcacgaatggctcatcatcgcgcaacacccgacggcatc
tctgtattccgtctcaccagtgtcatggaatctctccgtgccaaccacgagtcaggtgta
ctagctgaccgctcatccgtgggaccaactgcccacattcactcgggaatctcccaagtc
agagcccgtgattttgacgatccaccaggactgatggaaaaaacggagtacctgttgcgc
gagtgggtaacaatgcatcacagtcccaacaattcaagagaccccaccaaggcatttggt
ctctttgtccatcagatgaacatccacggtatcttgaagacagacgacctaatcacccgc
ttcttcaagctgagcacacaaatgtgcgtcgatctttgctaccgagcgctagctgagtct
aatttagcggtatcggctgtaagagccaagtgtttcttgactcttgacgcttttgtcaag
ctggtagcgttgctggtcaagcattctggagacacctctaacactcacactaaaataaac
ctgcttaacaaagtgctgggtattgtagctggtgttcttctgcaagatcatgaaatgcgt
ggtactgattttcaacaattgccgtatcatcggatttttataatgctgtttttggaactg
tgtgctccagaacccgtcctagaggctgttaattatcaagtactcactgcattttgtcac
actcttcacatattgcgtccagccaaggcttcagggttctgctacgcgtggctagaactc
gtttctcaccgagtttttattggccgtatgcttgcgattactcctcagcaaaaatgttgg
ggcatgtatgctcaactgctgattgatttgtttagatatctggctccgtatttgcgcaac
gctgaacttgccaagccagtactgtttctttacaaaggaactcttcgagttttgttggta
ctgttgcacgattttccggaattcctttgtgattatcactacggattctgcgatgcgata
ccgcccaactgtatccagatgagaaatttaattctcagcgcattcccgagaaacatgcgg
ctcccagacccgtttactcctaacctgaaggtcgatatgctgcaagagatagcacatgct
ccgagagtactcacaaactttgcgtcgataatccagccgcttagttttaaaaaggaactt
gattcttatctcaaggctcgagcacctgtcaccttcctgtcggagttgagaagcaactta
caggtgtcccaagaagctggaatgcggtacaacataccactgatgaacgcgctggttttg
tacgtgggaactcaagcgattgctttcattcgtaacaaaggacacacaccgaatatgtcg
actatcgctcattctgctcacatggacatcttccaaaatctcgccgttgatctcgacacc
gagggacggtacttgttcttgaacgctatcgctaatcagctacgttatcctaacagtcat
acgcattacttcagttgtacattattgtatttgtttgctgaagcaaatactgaagctatt
caggaacaaattacgagagtgcttttggagagattgatcgtcaacagaccacatccttgg
ggcttacttattacttttattgagcttattaaaaatcctacgtataaattttggactcat
gaatttgttcattgtgcacccgaaattgaaaaattatttgagtctgttgcgagatcatgt
atggttcaaaaacaagtgctatcaacacaatcaacacaagaaccagaattgccagagtga
DBGET
integrated database retrieval system
