Cottoperca gobio: 115009577
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Entry
115009577 CDS
T07513
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
cgob
Cottoperca gobio
Pathway
cgob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115009577 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115009577 (edc4)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115009577 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
115009577 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_WDR3_2nd
WDR55
PIN_8
Motif
Other DBs
NCBI-GeneID:
115009577
NCBI-ProteinID:
XP_029289520
Ensembl:
ENSCGOG00000001665
UniProt:
A0A6J2PVG0
LinkDB
All DBs
Position
6:4998776..5031164
Genome browser
AA seq
1413 aa
AA seq
DB search
MASNSNIDIEGATQHLRDILKLDRPGNITDAPSTDVPRIPSFNGELNGLLGAVGLLGSTD
RSIMSESTRPISTDLCSTQECQIICLSGDDGSTSIPITSNNVEIVASQDSSINSKARGSN
KVKIQPVAKYDWEHKYYYGRLIAVSNSFLAYAIRGANNHAMIRVLSVGFAERSLLKGFTG
AVTDLAFAHLDSSLLGCVDEAGNLMVWQLTCTGSKILDQIVVHIRRPEDSPLNSHRRLIW
CPFIQDEENPENQENQDDTSQTLALLHEDVAEVWDLEVLRANNSSWPIDATDLKDGLITV
KGHTQRVSEGALSPDGTVLATASHDGYIKFWQIYIEGGQDQPRCLHELRPHGGRPLSCLL
FCDNHKRQDPEVPFWRFLITGADQNQELKLWCTVSWTCLQTIRFSPDLFNSSVLPSLKAS
LDLSSEFLILTDVQRKVLYVMELHQDQDKGMASFTAVSEFLLTHPVLSFGVRDVAHSRLR
HTEVLPAEEESESMTTEGTQGPTESKSGIQIKLYCVHTKSLQDVQIWFQPNLSFSSALFL
PHSDSQDGFAGFSDHLTDQSSDKESGSGSQTDLRKIPSLPAPADFLSNLGANSGIKLMTP
DAFMTPSTSVPASPGSSASSLTIVTAISSNSDSTNSFLNVCRAIDDVSQSPHRAENNSSS
TLALSTSSLALSTSTLAISTSSPRAASAVLLPGLENMQALASPSGPLVLDGPQILDSPLL
PPLSSPTRARSPDVISSASTAMSQDMPEIASQTLQLQRGLVSSMESSPLSALQTDSMASA
ASALHLLTSPRTSNNSLLPLELGGADGPVGGAGESEPRLSHTPSLLENALSQENPGVGGG
SSDGSVIHTPWPAAPDITRETRNSLRDNGLGDCSREEAKDRRLSSPYHRRTYHLTQNDSQ
DAGAEQSDPDDEVSSLVSSSGNCGSRSSHRLPVKDWKTSPRGSPKVKRKTKKDDCESSQS
RQMDSGQMNAEVQDELLMLLRSQQRELTELRGQIEAMQSTIMVQVEHALTNHQEQEQRRL
ERVLAESQNHQQQLQEQLSQQLSHTLSSVLTNRMDKVLREEMKKTVPQTISKSLEPVTGQ
LNNTIAAKLTAVEITLKDNVSKVVKSKNTTDAIGRAAAEAMQGPIQAAYKDAFQSIVLPV
FERGCQSMFQQINDSFKQGTQEYIQQLETHMKNKKQREQEAREPIICQLQQMIDSFQTST
DQLANNITANVRAEVQHQIQMMVGNLQETILSHVQRIVKGEVSLAMKEQQAVVTSSIMQA
MRSAAGTPVPTAHLDYQTQQANILQLLQQGQLNQAFQQALSATDLNLVLYVCETIDSQQV
FGQHPCPLSQPVLLSLIQQLSSNLTTRSELKISYLEDAVMNLDHGDPLTRDHMSSVLAQV
RPKLFTFLQQDPHSPLSKRARRLMMMLQGLVSH
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaattctaatatagatattgagggtgcgacccagcatctccgggacattctc
aagctcgaccgtcccgggaacatcaccgatgcaccttcaactgatgttccgagaattcca
tcttttaatggagagctgaacgggttattgggagcagtaggccttctaggaagcactgat
cggtcaattatgtcagaatctaccagaccgatctccacagacctctgcagcactcaggag
tgtcagataatctgcctttctggtgatgatggctccacctctatccccatcacctccaac
aacgtggagattgtggcgagtcaagattccagcatcaacagcaaggctcgtggcagcaac
aaggtgaagattcaacctgttgctaagtacgactgggaacacaagtattattatggcaga
ctgatagcggtgtccaactccttcctggcctacgccatcagaggagccaacaaccatgca
atgattcgtgtcctgagtgtcggttttgctgagcgctctcttctgaagggcttcactgga
gctgtcacagatttggcttttgcccacctcgactcctccctgttaggttgtgtagatgaa
gcgggcaacctgatggtctggcagctcacctgcactggaagcaagatacttgatcagata
gtggttcatatccgacggccagaagactctccactgaactcccaccgtcgcctcatatgg
tgcccgttcatccaggatgaagagaacccggagaaccaggagaaccaggatgacacaagc
cagaccttagcccttctacacgaagacgtggctgaggtgtgggacctggaagtcttgaga
gccaacaacagcagttggcccattgatgccactgacctaaaagatggcctcatcacagtc
aagggacatacccagcgagtcagtgaaggcgctctgtctccagatggaactgtgttagcc
acagccagccatgatggatacatcaagttctggcagatatacatagaaggaggacaggac
cagccaagatgtcttcatgaattgcggcctcacggaggacgtcccctctcctgtcttctt
ttctgtgacaaccacaaaagacaggaccccgaagttcctttctggcggttccttataact
ggagcggatcagaaccaggagttgaaactgtggtgtactgtttcctggacctgtttacag
accatcaggttttctccagatctgttcaactcatcagttctgccaagtctgaaggccagt
ctggacctctcttcagagtttctcattctcaccgatgtacagaggaaggttctgtatgtg
atggagctgcatcaggatcaggataaaggcatggccagtttcacagcggtatcagagttc
ctactgacccaccctgttctcagctttggggtccgggacgtcgcccacagccgattgcgg
cacactgaggttctccctgcagaggaggagagtgagagtatgacaacagagggcactcaa
ggaccaacagagtccaagtctgggatccaaattaaactttactgtgttcacaccaagagt
ctgcaggatgtccagatctggtttcagcccaacttgagtttcagctctgcactcttcctg
cctcattctgattcccaggatggttttgcagggttctcagaccatctcactgaccagagc
tctgacaaggaatcaggaagtggctctcagaccgacctgaggaagatcccatcgcttcct
gctccagctgacttcctgtcaaacttgggagccaacagcggcatcaagctgatgactccc
gatgcctttatgacaccaagcacttcggtcccagcatctcctggcagcagcgccagcagt
ctgaccatagtgacagccatcagcagcaactctgactcgactaacagctttcttaatgtg
tgcagagctatcgacgatgtcagtcagagtcctcacagagcagagaacaacagcagcagc
actctggcactgtccaccagcagtctggcactctccaccagcactctggcaatctctacc
agcagcccaagagctgcttctgctgtgctgctgcctggactggagaacatgcaggcttta
gcgtctcctagtggtcctcttgtgcttgacggcccacagattctggactctcccctcctg
ccacctctgtcctctccgaccagggcccgctcccctgacgtcatctcctcagcctccaca
gccatgtcccaggacatgccagagattgcatcccagaccctgcagcttcagcgtggactc
gtgtccagtatggagtcttcacctctttctgctctccaaacagacagcatggcctctgct
gcatctgccctgcacctactcacctcaccccgcacatccaacaacagtctgttgcccctc
gaactcggaggtgcagatgggccagtgggcggggcaggggagtcagagcccagactcagc
cacaccccatctctacttgagaacgccttatcgcaggagaaccctggagttggtggaggc
tcatcagatgggagtgttatccacacaccttggcccgctgcgcctgacatcacgagagaa
accaggaacagtctcagggacaatggtcttggagactgttcaagagaggaggcgaaggac
agacgcttgagctcaccttaccatcgacggacgtatcacctcacacagaacgacagtcag
gacgctggcgctgaacagagtgaccctgatgatgaggtgtccagcctggtatcatcctca
ggaaattgtggctctcgttcttctcacagactaccagttaaggactggaagacctcacca
cgtggctcgccaaaagtaaagaggaagaccaagaaagatgactgtgagtcgtcccagtcc
aggcaaatggactctggtcagatgaatgcagaagtgcaggacgagttgttgatgctcctg
cgcagccagcagagggagttaactgaactgcgtgggcagattgaagccatgcagagcacc
attatggtccaagtagagcacgcccttactaaccaccaggaacaagaacagcgcagacta
gagcgagttctggcagagagtcagaatcatcagcagcagcttcaggagcagctcagccag
cagctcagccacactctcagctcggtgctaaccaacagaatggacaaagtgctacgagag
gaaatgaagaaaacagtcccacaaacaatctctaagagtctggagccagtgacgggtcaa
ctgaacaatacaattgctgccaagctgaccgctgtggagatcacgctgaaggacaatgtc
agcaaggtggtcaaatccaagaacacaacggatgcaatcggtcgagcggcagccgaagcg
atgcaggggcccatccaagcagcctataaagacgccttccagagcatcgtgctgcctgtt
tttgaaagaggctgccagtccatgtttcaacaaatcaacgacagctttaaacaaggcaca
caagaatacatccaacagcttgagacccatatgaagaacaaaaagcagagagagcaggag
gcacgagaacccattatttgccagctccagcagatgatcgacagcttccaaacctccacc
gatcagctggccaataacatcacagcaaatgtccgggcagaggtccagcaccagatccag
atgatggtgggaaatttgcaggagactattcttagccatgtgcagcgaattgtcaaaggg
gaggtgagcctggcaatgaaggagcagcaggcagtggtcacctccagcatcatgcaggcg
atgaggtcagcggccggcacacccgtccccacagcacacctagactaccagacacagcag
gccaacatcctgcagctcctgcagcagggccagctcaaccaggccttccagcaggctctg
tcagcgacagatctgaacttggtcttgtatgtgtgcgagaccatcgactctcagcaggtg
tttggtcagcacccctgtcctctcagccagcccgtgttgctgtcgctcatccagcagctc
tcctccaaccttacaacccgctctgagctcaaaatcagctacctggaggatgcagtgatg
aacctggaccacggcgacccgctgacaagagaccacatgtcctccgtgctggcccaggtc
agacccaagctctttaccttcctgcagcaggacccccacagcccgctcagcaagagggcg
cggcgcctgatgatgatgctgcagggtctcgtcagccactag
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integrated database retrieval system
