Corynebacterium glyciniphilum: CGLY_05060
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Entry
CGLY_05060 CDS
T03073
Symbol
mutM1
Name
(GenBank) Putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cgy
Corynebacterium glyciniphilum
Pathway
cgy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CGLY_05060 (mutM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgy03400
]
CGLY_05060 (mutM1)
Enzymes [BR:
cgy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CGLY_05060 (mutM1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CGLY_05060 (mutM1)
DNA repair and recombination proteins [BR:
cgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CGLY_05060 (mutM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
TMEM106_N
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AHW63460
UniProt:
X5E7P9
LinkDB
All DBs
Position
1102480..1103337
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AA seq
285 aa
AA seq
DB search
MPELPEVEALAADLGRCIGGSMVDRVDLTAFSALKTVAAAPSSLVGKTVKDVRRHGKFLD
LHVDDVHLIIHLARAGWIRCRDSVPVSRPKPGKGPLAVRLVLGDRCLDVTEAGTKKRLAL
YIVNEPSEVSGIAALGADPLGSEFTFEAFCGVLDEAGRARIKGVLRDQTLIAGIGNAYSD
EILHRARMSPFASAAMPTEERQRLYEAVTATITSEIRRLSGLDAADIKQAKKDGMQVHGR
AGEPCLACGDTVREVVFSDSSFQYCPTCQTDGKILADRGMSRLLK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctccctgaggtggaggcgctggccgcggatctgggacgttgcatcggcgga
agcatggtcgaccgtgtcgatctgacagcattctccgcactcaagacggtggccgcggct
ccgtcctccctcgtgggaaagacggtcaaggatgtccgtcgccacggaaagttcctcgac
ctccacgttgacgacgtccatctgatcattcacctggcgagggcggggtggatcagatgc
cgtgactctgttccggtaagccgccccaagcccggcaaaggaccactcgccgttcggctg
gtgctgggcgaccggtgtctggacgtcactgaagcggggacgaagaagaggctggcgctc
tatatcgtgaacgagccgtccgaggtgtcaggaatcgcggcgctcggcgccgatccactg
gggtcggagttcaccttcgaggcgttctgcggagttctggacgaggcggggcgcgcgcgg
atcaagggggttctccgcgaccagacgctcatcgcaggtatcggcaacgcgtactcggac
gagatcctgcaccgggcacggatgtcgccgttcgcgtccgcggcgatgccaactgaggag
cggcagcggctgtacgaggcggtcaccgcgacgatcacctcggagatccggcgtctctcg
gggctcgacgctgccgacatcaaacaggcgaagaaggacggcatgcaggtgcatggtcgt
gccggggaaccctgcctggcctgcggcgacaccgtacgggaggtggtgttcagcgattcg
tcgttccagtactgtcccacctgtcagaccgacgggaagatactcgccgaccgggggatg
tcgcgtctgctgaagtaa
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