Chromobacterium haemolyticum: CH06BL_46980
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Entry
CH06BL_46980 CDS
T06734
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chae
Chromobacterium haemolyticum
Pathway
chae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH06BL_46980 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chae03400
]
CH06BL_46980 (ung)
Enzymes [BR:
chae01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CH06BL_46980 (ung)
DNA repair and recombination proteins [BR:
chae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CH06BL_46980 (ung)
Prokaryotic type
CH06BL_46980 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BBH15450
LinkDB
All DBs
Position
5124710..5125432
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AA seq
240 aa
AA seq
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MQALSYLSPALARVHPAWEQVLSTPDIQQQLAGIDRELQAQQAQGKVLFPPAPLTFNALT
FTAPADVRVVILGQDPYHGDGEAMGLSFSVPPGVRVPPSLRNLYKELAADLGCGVPNSGD
LTHWAQQGVLLLNSVFTVERDKAGSHAKLGWQMVSDALIDAVNAQSAGCVFLLWGNWAKT
KAERIDASRHLVLDAAHPSPLSASRGFHGCRHFSQVNAWLLSRGRGAIEWGVPTPQNNLF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcattgtcttacctgtctcccgccctggcccgcgttcatccggcttgggaacaa
gtgctgtcaacaccggacattcaacagcaactggccggcatcgacagggaactacaagct
cagcaagcgcagggcaaagtcctcttcccgcctgcgccgttgaccttcaacgcgctgacc
ttcaccgcgccggccgatgtccgcgtggtgatactggggcaagatccctaccatggcgac
ggcgaggcgatgggcttgtcgttttccgtgccgccaggcgtgcgggtgccgcccagcttg
cgcaatctgtacaaggaactggcggcggatctaggctgcggcgtgcccaatagcggcgac
ctgacccactgggcgcagcaaggcgtgctgctactcaacagcgtgttcaccgtagagcgg
gacaaggccggcagccacgccaaactgggctggcaaatggtcagcgacgcgctgatagac
gccgtcaacgcgcaaagcgccggctgcgtgttcctgctgtggggcaattgggctaaaaca
aaggccgagcgcatcgacgccagccgccacctggtgctggacgccgctcatccatcgccg
ctgtccgccagccgcggcttccacggttgccgccatttttcgcaagtcaacgcctggttg
ctgtcccgcggccgaggcgccatcgaatggggcgtcccgacaccgcagaacaacttgttc
tga
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integrated database retrieval system
