Clupea harengus (Atlantic herring): 105890649
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Entry
105890649 CDS
T09045
Symbol
tnnc2.2
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04814
Motor proteins
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105890649 (tnnc2.2)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
105890649 (tnnc2.2)
04820 Cytoskeleton in muscle cells
105890649 (tnnc2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105890649 (tnnc2.2)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
105890649 (tnnc2.2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
SPARC_Ca_bdg
SAPC2_N
EF-hand_11
EF_EFCAB10_C
EF-hand_EFHB_C
Syntaxin
RTX_C
SapB_1
DUF533
Pam3_gp59
Motif
Other DBs
NCBI-GeneID:
105890649
NCBI-ProteinID:
XP_012672165
Ensembl:
ENSCHAG00000018972
UniProt:
A0A6P3VHP6
LinkDB
All DBs
Position
4:complement(7398012..7400466)
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AA seq
160 aa
AA seq
DB search
MTDAQQEARGYLSEEMLNEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPTREELEEII
EEVDEDGSGSIDFEEFLVMMVRLLKEDQAGKSEEELAECFRVFDANADGYIDRDEFAEII
RSTGEQVTEDEIDELLKDGDKNSDGMLDFDEFLKMMENVQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcgcaacaggaggctcgtggctacctgagcgaggagatgctcaatgagttc
aaggctgccttcgatatgttcgacaccgacggtggcggtgatatcagcaccaaggagttg
ggtcaggtcatgagaatgttgggccagaacccaaccagagaggagttggaggagatcatc
gaggaggtcgatgaggatggcagcggttccatcgacttcgaggagttcttggtcatgatg
gtgaggctcctaaaggaggatcaggctggcaagagcgaggaagagttggcagagtgcttc
cgtgtgttcgacgcgaacgctgatggatacatcgacagagatgagttcgctgagatcatc
cgtagtactggtgaacaggttacagaagatgagattgatgagctgcttaaggacggagac
aagaactctgatggcatgctggactttgacgaattcctcaagatgatggagaacgtgcag
taa
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integrated database retrieval system