Clupea harengus (Atlantic herring): 105892002 Help Entry 105892002         CDS       T09045                                  Name (RefSeq) collagen alpha-1(IX) chain   KO K08131   collagen type IX alpha Organism char  Clupea harengus (Atlantic herring) Pathway char04510   Focal adhesion char04512   ECM-receptor interaction char04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:char00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     105892002  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     105892002   09142 Cell motility    04820 Cytoskeleton in muscle cells     105892002  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:char00535]     105892002 Proteoglycans [BR:char00535]  Extracellular matrix (ECM) proteoglycans   Others    105892002 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Laminin_G_3 Laminin_G_2 Motif Other DBs NCBI-GeneID:  105892002 NCBI-ProteinID:  XP_031442322 UniProt:  A0A6P8H3U0 LinkDB All DBs Position 19:complement(14595417..14623881) Genome browser AA seq 930 aa AA seqDB search MSLWVSSAIVLLSMLSAPALAQLDLNRLDGDTVCPPMRNGQDDLPGFDLITQFQLDVIPL KGVRKVEGSTSHQVAYRLDREANFQIPTRLNFPRGFPEEYSFMTTFRMIKNTVNKVWNLW QIVDENGVKQAGLRLNGDQQALEFFLTTFDGDLQTVTFPGLSVLFNTKWHKVMVGVERDQ VTLYVDCHPVDQKPIKEKGYINTEGDTLIGRLDADSSTSVVFELQWMLIHCDPKRAQRES CSELPQTEMYANAEPDRSVVGPPGVAGPEGPRGPQGEAGRDGRDGLPGSAGTPGAIGSKG ELGEIGLPGQRGVPGLPGSPGMMGPMGPRGTVGERGLPGFPGPAGPAGAEKPGPPGLPGK AGTPGDEGNIGPEGSPGPRGGLGLPGPPGPPGPVGPAGTPGIGNSIEDGEPQCEAACPAG PQGMPGMPGMKGHKGLAGTDGDPGTPGEKGDEGPAGEAGPPGRMGDDGQRGPIGFPGTLG EKGDRGPPGYNGIPGPTGPPGSPGVEGIRGRLGHEGPKGDEGAVGAAGPTGPVGPMGETG EPGVDGLDGVPGVNGSKGDAGTPGPSGVRGIVGIPGLPGKQGLKGPTGDKGDTGTEGAVG PIGLVGKTGEPGAAGKDGATGAKGATGETGKQGPVGVTGLPGVEGEKGDMGAIGPRGIKG HTGLKGDQGAIGPIGPKGSMGDTGFNGDSGVKGDQGPPGIQGIKGESGEKGQRGSTGAEG RPGQPGHEGVTGPQGARGLEGEHGIVGPPGPRGLPGPKLADDKIKAMCAAVVEEHLEAYK KELAKKPLPLGAPGSPGLAGAPGPPGLPGANGEAGPRGFLGPKGPPGFYGLPGTPGTKGD AGVKGDKGEDGVGTRGSQGEPGPQGEDGIPGVGKDGKDGARGEHGSAGLPGPPGTRGATG APGLCDPSNCFRPQPLYLMSGKKPYNVKGP NT seq 2793 nt NT seq  +upstreamnt  +downstreamnt atgtctctgtgggtgtcctctgccatcgtcctgctgtccatgctctctgcccctgccctg gcacagctggacctcaacagattagatggtgacactgtttgcccacccatgagaaatgga caagatgaccttccaggttttgatctgatcacccagttccagctggacgtcatccccctg aagggagtcaggaaagtggagggttccacatcccaccaggtggcctaccggctcgacagg gaggcaaacttccagattccgacacggcttaacttccctcgcggtttccctgaagaatat tctttcatgaccaccttccgcatgatcaagaacactgtcaacaaggtgtggaacctctgg cagatcgtggacgaaaacggtgtcaagcaggctggcttgcgtctcaacggcgaccagcag gccctggagttcttcctgaccacgtttgacggcgacctccagacggtgaccttccccggc ctctccgtcctcttcaacaccaagtggcacaaggtcatggtgggcgtggagagggaccag gtcaccttgtatgtggactgccacccagtggatcaaaagcccatcaaggagaaaggctac atcaatacagagggtgacactctcatcggcaggctggatgctgactcaagcacttctgtt gtgtttgagctgcagtggatgctgattcactgcgaccctaagagagcccagagagagagc tgctctgagctcccacaaactgagatgtatgccaatgctgagcccgatagatcagtcgtc ggtcctccaggcgtggcgggaccagaggggccccgtgggcctcagggagaggctggcaga gatggcagagatggtcttccaggctcagctggtacccccggtgctattggaagcaaagga gagctaggagagatcggcctgcctggacaaagaggtgttcctggccttccgggatctcct ggtatgatggggccgatggggcctagaggaactgtgggtgaaagaggactgcctggtttt cctggacctgctgggcctgctggagctgagaagcctggacctcctggtctcccagggaaa gccggcactccaggagatgagggcaacatcggacctgagggctcaccagggcccagagga ggtcttggtcttccaggaccacccggaccccctggacctgtagggccagcgggcacacct gggatagggaactcaatcgaagatggggagcctcagtgtgaggccgcctgtcccgccggc cctcaggggatgccaggcatgccagggatgaagggacataaaggtttggctggtaccgat ggtgatccaggcacacctggagagaagggagatgaaggacctgcaggagaggcaggaccc cctggacgcatgggagatgatggtcaaagagggcctattggatttcctggcacactcgga gaaaaaggagataggggtcctccaggttacaacggcatcccagggcccactggaccacca gggtcccccggtgtggagggcatcagaggtcgtctgggtcacgaggggcctaaaggtgat gagggggcagttggcgctgcaggaccaaccggaccagtcggcccaatgggggaaacagga gagcctggtgtcgatggcttggatggagtaccaggagtaaatggaagcaaaggagatgct ggcacacctggaccatctggcgtgagggggatcgttggaatacctgggttgcctgggaaa cagggacttaagggaccaactggggataagggtgacacaggaactgaaggagcagtggga cccatcgggctggtgggcaaaacaggtgaaccaggagcagcggggaaagacggcgcgaca ggagccaagggagccaccggtgagacagggaagcagggtcccgtgggagtgacaggactt cctggcgtcgagggagagaagggtgacatgggtgccattggcccaagaggaatcaaaggt cacacaggactgaaaggagatcagggtgctatcggcccaatcggtccaaaaggaagcatg ggtgatacaggatttaacggagactcaggagtaaagggtgaccagggtcctcctggcatt caaggaattaaaggagagtctggagagaagggacagcgcgggtccacgggagctgaggga cgtccaggacagcccggtcacgagggtgtcacaggcccacagggtgctcgtggcctggag ggagagcacgggatcgtaggacctccagggccccggggtctgcctggccctaaacttgct gatgacaaaattaaagcaatgtgtgctgctgtggttgaagaacaccttgaggcatacaag aaagagcttgcaaagaaacccctgcctctcggagctcccggatccccagggctcgccggg gcacctgggcctccaggcctgcccggtgctaatggagaggcgggtcccagggggttcctg ggtcctaaaggacctccaggcttctatggtttacctggcacaccaggcaccaagggtgat gctggagttaaaggagacaagggagaagatggcgtgggcaccagaggaagccaaggagaa ccaggacctcaaggagaggatggcatccctggtgtcggtaaagatggcaaagatggtgcc cgcggcgagcatggatccgccggccttccaggcccaccgggcacccgaggagccacaggt gctcccggcctctgtgacccctcaaactgttttagaccccagcccctctacctgatgagt ggcaaaaaaccctacaacgtcaagggcccctga

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