Clupea harengus (Atlantic herring): 105893179
Help
Entry
105893179 CDS
T09045
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105893179 (brwd3)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105893179 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
105893179
NCBI-ProteinID:
XP_031427277
Ensembl:
ENSCHAG00000019126
UniProt:
A0A6P8FVS1
LinkDB
All DBs
Position
8:complement(1283186..1307559)
Genome browser
AA seq
1764 aa
AA seq
DB search
MAAEQCSQLEAELYYLIARFLHSGPCKKSARILVEELEEYELVPKRWSWDGKQYKRNFDD
WVALNQHIPADYLLRVCKQVGPLIDQHVPPSVPGVCTLLGTGKQSLLRTTKDCNTVWSSS
TVAALHRGRPPEPPVSVERPPNIASIMGARQTAGVARFGHAFPVSTYQHMKMHRRILGHL
SSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMTVNHENTLIASA
SCDKIIRVWCLRTCAPITVLQGHAASITSIQFSPAVTGSARVLASTGADGMVCFWQWNAL
TMKFNDRPVKFIERSRPGVQISCCSFSCGGMFLATGSTDHVIRVYYLGSETPMKLSELDA
HTDKVLAVQFCNNSDGLRFVSGSRDGTARIWQYQQQEWKSICLDMSARLPGSTVVSGEDK
TTKLVVTMVAWDRSDRMVVTAVSNCLLKVWNSNSGQLLHVLSGHDDEVFVLEAHPFDWRI
MLSAGHDGNIFVWDLSRGTKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHVLIF
GFGCSRPYEKIPDQMFFHTDFRPLIRDTNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTL
FQRLVPGRENCKEEQLVPQLGYMANGDGEVVEQVIGQQTSEEEQEESPLDDLIRQLQQQQ
DGQPNPAQMLEGAEGGEGLPSPPNVGLRRSGQVEGVRQMHLNAPRSQMATERDLLAWSRR
VMVSEVPTSVLRGMAQSRHAKGECERTLYHMENRRKPVQSATRAEPEYMSLRSLRRTQRK
KKQEQRHSYQTRSARERRALRRSSVLGSPHGSDSDSEAEQMEEEQVDASDASSDGEARWK
SDSSSSDSSSEYSDWTADAGINLQPPKRSTRRLVRAPESSSSENEADAQGEGEEEEEEKK
KKKEAEKKKKQKQPKQKPGSGSSAAEWTPPSWITDTMPRRLPFVPQMGDELIYFRQGHEA
YVRAVRRAKAYNINHLKQPWNKLDLRDQEVVKVIGIKYEVGPPTLCCLKLAFLDALSGKM
TNESFILKYHDMPDVIDFLVLQQFYNEAKERNWQPESRFRSIIDDAWWFGSVESHQPLEP
EYPDSLFQCYDIRWDNGETEKMSPWDLEPIPEEAEIPEDFGDCVQVTEAEFQSLLYKPQE
GEWAAQTRDEDCERVIQAIDQLLSLDVAKEFKSPVDLRDYPLYCSVVSYPTDLSTIRQRL
RNRFYRRISALMWEVRYIEHNARIFNEPQSPIVTAAKAVTDVLLRFIGDQSCVDIVELHH
RLKTELSSVEDENDVDSDTPGTSTGQQKRGVVLDINAWKVPCKDLLRRMIDSPDSEPFRQ
PVDLFEYPDYRGIIDTPMDLGTVLETLSGENYENPSEFAKDIRLIFSNSKAYTPNKKSRI
FSMTLSLSAFFERQIIAIISDFKSAVQSQRRTHQRMNNSKRLQDSPPVSPKGKNKSGKKP
KTQQRSRSRTRKVSQASESQEITVDEDSQPSTSTSSSSSSSSSSGQLGANRLMRSRALPS
KTSELCNGPTVNGSRQSHRRGTSRTATKEMPASVSSSSSSSSSSSSSSSSSSSSSSSSES
GDSDVEVGQFLDGGDHDYSKAPCLSHRDKGKVATVAKRKLKGGEAEGQAKRLRRDEKVEP
PEEEEEEEEEEEEEVEVEEEVEVEEQSEEEELEEEEEQEEEEEERDEEEEKEDDDEEEGE
EGEEGEQRGEAPPRTAAGLRSSQRAAKLARVNTRNQGRRTVLYNDESEEEGAAADPLNLG
MSRSGRVRRMTERARVSHLMGWTH
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgaacaatgttcgcaacttgaagccgaattgtattacctgatcgccagattt
ctccattcgggaccgtgcaaaaaatctgcaaggatcctggtggaggaactggaagagtat
gagttggtcccgaaacggtggagttgggatgggaaacaatataagcgaaacttcgatgac
tgggtggcactgaaccagcatatccctgcagattatctgctgcgcgtgtgtaaacaggtg
ggaccactgattgaccagcatgttccaccaagtgttcctggagtctgcaccttactgggc
actggaaaacaatctcttctccgcaccacaaaagattgtaacacggtatggagcagttcc
acggtggcggctctacacaggggacggccaccagaacctccagtcagtgtggagaggccg
cccaacatcgcatctatcatgggtgctcgccagactgcaggcgttgctcgttttgggcac
gccttccctgtctcgacctatcagcacatgaagatgcaccggcgaattctgggtcatctc
tcctcagtttattgtgtgacgtttgatcgcactggacgacgcatcttcactggttctgac
gactgtctggtgaagatctgggcgacagacgacggccgtctcctagcaactctccgtggc
cacgcggcggaaatttcggacatgacggtcaaccacgagaacactctcattgcctcagcc
agctgtgacaaaatcatccgcgtgtggtgtctgaggacctgcgctcccatcaccgtcctc
cagggccacgccgcctccatcacatccatacagttctccccggcagtcacaggctctgct
cgagtgctggcctccaccggtgcggatggcatggtgtgtttctggcagtggaacgccctc
accatgaagttcaatgaccgtccagtgaagttcattgagcgttcacgcccaggtgtccag
atctcttgctgttccttcagttgcggtgggatgttcctggccacggggagcacagatcat
gtgatcagagtgtactacttaggctctgaaacacccatgaagctctctgagctagatgct
cacacggataaagtcctcgccgtgcagttctgcaacaacagcgatggccttaggtttgtg
agtggtagccgtgatggcacagctcggatctggcagtaccagcagcaggagtggaagagc
atctgcttggacatgagtgcccgtctgccagggagtacagtggtgtcaggagaggacaag
acgaccaaactggttgttacaatggttgcctgggaccgcagtgaccgaatggttgtcact
gctgtttctaactgcctgctgaaagtgtggaattccaacagtggccaactgctacacgtg
ttgtcgggtcatgatgacgaggtgtttgtgttggaagcccacccgttcgactggcggatc
atgctctctgctgggcacgatgggaacatctttgtctgggacctcagcagaggaaccaag
atccgaaacttctttaacatgattgagggacaaggccatggtgctgtctttgactgcaag
ttctcagctgatggtcaacactttgcctgcacagattctcacggtcacgtgctcatattt
ggtttcggatgcagtaggccgtatgagaagattcccgaccagatgtttttccacacggat
ttccgtccgctgatccgggacacgaataactacgtgttagatgagcagacccagcaggcc
cctcacctcatgcccccccccttcctggtggatgtcgacgggaacccccaccccaccctc
ttccagaggctggtcccgggaagagaaaactgcaaagaggagcagctcgtcccccagctg
ggctacatggctaacggtgatggggaggtggttgaacaggtgattggccagcagacgtca
gaggaggagcaggaggagagtcccctggatgacctgatcagacagctgcagcagcagcag
gacggccagcccaaccccgcccaaatgctggaaggtgctgagggtggagagggtctccca
tcgccccccaatgtgggactccggcggagcgggcaggtggagggcgtgcggcagatgcac
ctcaacgccccccgcagtcagatggccaccgagagagacctgctggcctggagcaggagg
gtgatggtcagcgaggtcccaaccagcgtgctcagggggatggcgcagagcaggcacgcc
aaaggagagtgcgagcgcaccttataccacatggagaataggaggaaacctgtacagagt
gccacacgagcggagccagagtacatgtcgttgcgctcgctacggaggacccagcgcaag
aagaagcaggagcagcggcactcctaccaaacccgctccgcacgggagcgccgtgcacta
cgccgcagctccgtcctcggatcaccgcacgggtccgactcggacagcgaggcagagcag
atggaagaggagcaggtggatgccagtgatgcttcgtcagatggagaagctcgttggaag
agtgacagcagctccagtgactcgtcaagcgagtactctgattggacagctgatgcgggg
atcaacctccagcctccgaagcggtccaccaggcggctggttcgtgccccagaaagcagc
agctccgagaatgaagcagatgctcagggcgagggtgaagaggaggaggaggagaagaag
aaaaagaaagaggcggaaaagaagaagaaacaaaaacaacctaaacaaaagcccgggtct
ggcagttcagctgcggagtggacccctccatcctggatcacagacaccatgccccgccgc
ctgcctttcgtgcctcagatgggagatgagctcatctacttccgtcaaggtcacgaggcg
tacgtacgtgcagtacgtagggccaaagcctacaacatcaaccatctgaagcagccgtgg
aacaaactggatctcagggatcaagaggtggtgaaggtgattggtattaaatatgaggtg
ggcccgcccactctctgctgcctgaaactggccttcctcgacgcactctcagggaagatg
actaacgagtccttcattctaaagtatcatgacatgcctgatgtcattgactttttggtg
ctacagcagttttacaacgaggcaaaagaacgcaactggcagcctgagtccaggttccgg
agcatcatagacgacgcgtggtggtttgggtcggtggaaagccatcagccgctcgaacca
gagtacccggatagccttttccagtgctatgacatcaggtgggacaatggagagacggag
aaaatgagtccgtgggatctggagccgatccctgaagaagcggagatccccgaggatttt
ggagattgtgtccaagtgacggaggcggagtttcagtctctcctgtacaagccccaggaa
ggagagtgggcggcacaaacgcgcgatgaggactgtgagcgggtgatccaagccatcgac
cagctgctctctttggatgtggcgaaggagttcaaaagccctgtggatctgagggattac
ccactctactgctccgtggtgtcctaccctactgacctcagcactattcgacagcgcctc
cggaaccgcttctacaggagaatttctgctctcatgtgggaagtgcgttacatcgagcac
aacgcgcgcatcttcaacgagccacagagtcccatcgtcactgccgccaaggcagtcact
gacgtgctgctgcgcttcatcggggatcagagctgtgtagacatagtagagcttcaccac
aggttgaagacagagctcagcagtgttgaagatgagaatgatgttgactccgacacccca
gggacatcaactggtcagcaaaagcgaggggtagtgctggacatcaatgcgtggaaggta
ccctgtaaagatctcctgcgcaggatgattgacagccccgattccgagccgttccgacag
cccgttgacctctttgagtatccggattatcggggtattattgacactccaatggattta
ggaaccgtgttagagacactatctggagaaaactatgaaaatccttcagagtttgccaaa
gacatccgtctgattttcagtaattccaaggcatacactccaaacaaaaagtcaaggatt
ttcagtatgactctgagtctgtccgcattcttcgagaggcagatcatcgccataatctca
gattttaaatctgcagtacaaagccaaaggaggactcaccagagaatgaacaacagcaaa
aggttacaggactctccaccagtcagccccaaagggaaaaacaagtccgggaagaaacca
aaaacccagcagagatccagaagccgcacacgcaaagtttcacaagcttcagaatcccaa
gaaattacagtggatgaagacagtcaaccctcaacttcaacttcatcttcctcctcatca
tcctcctcctcagggcaactaggagccaacagattaatgcgcagccgagctttaccttcc
aaaacctctgaactatgtaatgggccaacagtcaacggcagccgtcagtcacacagacga
ggcacttcgcgcaccgccacaaaagaaatgcctgcatctgtaagttcgtcgtcatcttcc
tcgtcatcatcgtcttcctcctcttcgtcatcttcgtcctcttcctcctcatcagagagc
ggagacagcgacgtggaggtggggcagttcttggatggcggcgaccacgactacagtaaa
gcgccatgcctttcccatagggacaagggtaaggtagccaccgtcgctaagagaaaactg
aagggaggcgaagcagagggccaggcgaaaagactgcggagagatgaaaaggtcgagccg
ccagaagaggaggaggaggaggaggaggaagaggaggaggaagtggaagtggaggaggaa
gtggaggttgaggaacagtccgaagaggaggaattggaggaggaggaggagcaggaagaa
gaggaagaggagagagacgaggaagaggagaaggaagacgacgacgaggaggagggggaa
gagggcgaggagggggagcagagaggagaggcaccgccacggacggctgcaggcctgagg
tcaagccagcgagcagcgaaactggcccgggtcaacacgcgtaaccagggccgacggact
gtcctgtacaacgacgaatctgaagaggagggggccgcggcagacccgctcaacctgggc
atgtcccggtcaggccgcgtgcggcgcatgacggagcgggcccgggtcagtcacctcatg
ggctggacgcactga
DBGET
integrated database retrieval system
