Clupea harengus (Atlantic herring): 105893230
Help
Entry
105893230 CDS
T09045
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105893230
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105893230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
YVC1_C
Egg_lysin
Motif
Other DBs
NCBI-GeneID:
105893230
NCBI-ProteinID:
XP_042564445
Ensembl:
ENSCHAG00000026728
UniProt:
A0A8M1KPB3
LinkDB
All DBs
Position
8:complement(26971310..26986854)
Genome browser
AA seq
924 aa
AA seq
DB search
MSQLYYGRTDNSSYQDRIPLRIVRSESELSPQEKTYLTAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIGIENENLEIIELLLSFSVYIGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSVPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEMILNYRDDVNPLEEDASNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRKQHWMGKSVTCIFIGLLFPLFSLCYMTVPKNTFGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVHSQADRQGPKPTIVEWMILPWVLGFIWAEIKQ
MWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAFTKYGGEKPRNEWEMWHPTLVAEAL
FAIANIFSSLRLISLFTANAHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YETQAKDEKDNCKGIRCKDQNNAFSTLFETLQSLFWSVFGLISLYVTNVKPDHEFTEFVG
ATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPPPF
NIIPSPKSLWYLFKWTKKRIFRKKRIERTETFETIGRRAAENVRINHQYQEVLKNLVKRY
VAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMLKGGKPGLQAVKGSAGSSSLPFPD
HSHRCSQPPAPSGQLKSKLNLFTAASMLQQGGAKAATRPPEPFGGLANGSVPGLAAEGQQ
ANTEASSDRDQGALQLRQRGAGQSQIYSVSEEVGEWDRDEARSVDGDRGAAMETAEPSSE
RRMNDERKDSQKDEEQTEGKEGAK
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactacggtcgaacagacaactcttcataccaggaccgcatcccttta
cgaatcgtgaggtccgagtctgaactctctccacaggaaaagacctacctgacggcagta
gagaagggagactatgccagtgtgaagcaggcactggaggaggctgagatctacttcaag
ataaacatcaactgcatcgatccgctcggacgcacagcgctgctcatcggcatcgagaat
gagaacttggagatcatcgaacttttgctcagttttagcgtttatatcggggatgccttg
cttcatgccatccgcaaggaggtggtcggcgccgtggagctcttgctcaatcacaagaag
cccagcggggggatgcaggtgccgcccattttgctcgacaagcagttctcggacttcacc
ccggatataacccccatcatcctggccgcgcacaccaacaactatgagatcatcaagctg
ctggtccagaagggggtgtcggtgccgcagccgcacgaggtgcgctgcaactgcgtggag
tgcgtgtccagctcggacgtggacagcctgcggcactcgcgctcgcgcctcaacatctac
cgggccctgtccagcccctcgctcatcgccctgtccagcgaggaccccttcctcaccgcg
ttccgcctcagctgggagctgcaggagctcagcaaggtggagaacgagttcaagtcggag
tacgaggagctgtcgcgccagtgcaagcagttcgccaaggacctgctggaccagacgcgc
agctcccgcgagctggagatgatcctcaactacagggacgacgtgaacccgctggaggag
gacgcgagcaacgacttggcgcggctgaaacttgccatcaagtaccaccagaaggagttt
gtggcccagcccaactgccagcagctcctggcgtcccgctggtatgacgagttccctggt
tggaggaagcaacactggatggggaagtcggtcacgtgcatcttcatcggcctgctcttc
cccctcttctcgctgtgctacatgaccgtgcccaagaacacctttgggcttttcatccgc
aagcccttcatcaagttcatctgtcacacagcgtcctacctcaccttcctcttcctcctc
ctcctggcctcccagcacattgtccattcccaggcagataggcagggccctaaacccacc
atagtggaatggatgatccttccctgggtcttaggtttcatctgggcagagattaagcag
atgtgggatggcggctttcaggactacatccatgactggtggaatctcatggattttgtc
atgaactccctttatctggccaccatctccctgaagatcgttgcattcacaaagtatggt
ggcgagaagccaaggaacgagtgggagatgtggcaccccaccctggtggccgaggccctg
ttcgccatcgccaacatcttcagctcgctgcgcctcatctccctcttcacggccaacgca
cacctgggcccgctgcagatctcgctgggccgcatgctgctggacatcctcaagttcctc
ttcatctactgcctggtgctgctggccttcgccaacggcctcaaccagctgtacttctac
tacgagacgcaggccaaagacgagaaagacaactgcaagggaatccgttgtaaggaccag
aataacgctttctccacgttgtttgagacgctgcagtccctgttctggtcggtgttcggc
ctgattagcttgtatgtcaccaatgtcaagccagaccacgagttcactgagtttgtcgga
gcgaccatgtttggaacttacaacatcatctctctggtggtgcttctgaacatgcttatt
gccatgatgaacaactcctaccagcacattgctgatcatgctgacatcgagtggaaattt
gccaggactaagctgtggatgagctactttgaagaagggggtactctacctcctcctttc
aatatcatccccagcccaaagtccctctggtacctctttaagtggaccaagaagcgcatc
ttcaggaagaaaagaattgaaagaaccgagacttttgaaacgattgggagacgtgctgct
gagaacgtgcgaataaatcaccagtaccaggaagttctcaaaaatttagtcaagagatat
gtggctgcaatgatcagagatgcgaagacagaggaaggactgacagaagaaaattttaag
gaactaaagcaggacatatccagcttccgatacgaggtgctaggcatgttgaaaggtggc
aaacctggcctgcaggcggtcaaagggagcgctgggtcctctagcctgccgtttcctgac
cactctcacaggtgctctcagccaccagcaccctctgggcagctgaagagcaaactcaac
ctgttcaccgccgcttccatgctgcagcagggaggcgccaaagcagcgacccggccgcct
gagcccttcggcggcctggccaacggctccgtccccggcctggccgcggagggccagcag
gccaacacagaggcttcctccgaccgagaccagggtgcgctgcagctgcgccagcgaggc
gcgggccagtcgcagatctactccgtgtccgaggaggtgggggagtgggacagagacgag
gcgaggagcgtggatggagacaggggcgccgccatggaaaccgcggagccgtccagcgaa
agaaggatgaatgatgaaagaaaagactcccagaaggacgaagaacagacagagggtaaa
gagggtgccaagtag
DBGET
integrated database retrieval system
