Clupea harengus (Atlantic herring): 105893978
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Entry
105893978 CDS
T09045
Symbol
tex10
Name
(RefSeq) testis-expressed protein 10 homolog isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105893978 (tex10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105893978 (tex10)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
105893978 (tex10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TPR_CAND1
HEAT_MROH2B_C
TOR1L1_N
HEAT_GCN1
HEAT_EF3_N
MMS19_C
HEAT_DAAF5
VMAP-M8
HEAT_GCN1_C
HEAT_EZ
MINION
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
105893978
NCBI-ProteinID:
XP_031432532
Ensembl:
ENSCHAG00000001485
UniProt:
A0A6P8G8A2
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All DBs
Position
11:complement(27632081..27653525)
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AA seq
916 aa
AA seq
DB search
MTKTTKKKRQDDFHKVKLKVGKKIPKPDNATNVSFRSKGIRLPEQLKRDGSGPTTHRQLG
IKDLLSQLHHYSASVKHGALCGLRELLTSHPALVEQHLSTLLSEVAAAFTDKDGSVRSAA
LRLLRFVAQCVPSERVGPFFPLLSAHLTCAMTHIQAGIQADAMLVLDVLLEHYPALLAHR
HAHLLTNFLELISRQRLGSGAKGSEKAAAGKAGWVLTVTPDRKVTGQQWRLTVLLRLSRF
LQAVVEERPEEEGVVSADREKGIITPLELNWDDHPFGKRGIQLFENSGATPTPHSTYRLR
PDVDHGVGAGEMLSSVEEVRGFAETLVPLLLEVWMETAGAENGHLLSGDSMVLMQQILTI
LQLLRRLTPQHHLQEELDTWLRNTYLSDFKLHFMKNFPYNQLDTPSPRHKKRNRQQVLSS
GGSGASVEPLVLNVTLCQVMVTLSHRGSGQPEGQDADWLGPIRSFVRETLTGGSKLSSKH
LGALLEVVWRLVVSQKTRAAVSEELLQAVYVQYQQRNLTVGVRLMLLRFFSQLYLKERLN
RSKILTRWLAALPVQLVQLGSRNPQLSAQVLQTLQHAAARNNKELLSSLQMHACNLYDPQ
EGCVVVLPVESQQRLVQMLYFLPAFPPELLSCLSRVCNTGRVSAGLAATLIRIIHLRSSL
SGWTSNSQEAAVRDGDYLSFLFSTLTGFSSDELAVLQQADEDALSPPSPLSPFSIYPTPL
EQFTHHWDIVEEVCHCLSTLGSNSQCFDILQNGICKNLVGLTVLPDSVCAAVLRVVARLL
DLSFLPSDTLLHFLSDCCLSMLSLLLQLEHSAHKREAVWGACLAALSSVPRLLRLLLQSL
RVCDMCEEEFPQLAQILSLLMQHTHLRNHMVANASLLQHIIQELTRYCGGESREQWLTDL
LYCYSATLSGPRGNLY
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaacgacgaaaaagaaacgtcaggatgatttccacaaagttaaactaaaggtg
ggtaagaagataccaaagccggacaatgcaacaaatgtcagtttccgatcgaagggcatc
cgtctcccagagcaattgaagcgcgatgggtccggtccaaccacacatcgtcagcttggc
attaaggatctactctcccagctccaccactacagtgcctcagtgaagcacggtgcgttg
tgtggccttcgcgagctcctgacatcccaccccgcgctggtggagcagcatctctccact
ctcctgagtgaggtggccgctgcgttcacagacaaagatggcagcgtgcgttctgccgcc
ctgcgactgctgcgctttgtggcacagtgcgtgcccagtgagcgcgtgggtcctttcttc
ccacttctcagcgcccacctgacctgtgccatgacgcacatccaggcggggatccaagcg
gatgccatgctggtcctcgatgtcttgttggagcattaccctgctctgctggcccacaga
catgcccatctgctcactaactttctagagctcatctcccggcagcgcctgggtagtgga
gccaaaggcagcgagaaggcagcggcagggaaggctggatgggtactaacagtcacaccc
gatcgaaaggtcacaggtcagcagtggagactcactgtgctgctcagactgagccgattc
ctgcaggctgtagtggaggagaggccggaggaggagggtgttgtgtcagcagacagggag
aagggaataattactcctctcgaactgaactgggacgatcacccattcggcaaacgagga
atccagctgtttgagaattctggagccacacccacgcctcattccacctatcgactcaga
ccagatgttgatcatggcgtcggagcgggagagatgctgagctccgtggaggaggtgcgt
ggcttcgcagagacactggtgccgctgctgctggaggtgtggatggagacggcgggcgca
gagaacgggcatctgctctcgggggactccatggtgctcatgcaacagatcctcaccatc
ctgcagctcctgaggcggctgactccacagcaccacctacaggaggaactggatacatgg
ctgcggaacacctatctcagtgacttcaagctgcacttcatgaagaactttccctacaac
caactagacacaccatccccccggcacaagaagaggaaccggcagcaggtgttgtcgagt
ggggggagcggggccagtgtggagcccctggtgctgaacgtgacgctgtgtcaggtgatg
gtgacgctcagccacagagggtcaggccagcccgagggccaggacgccgactggctcggg
ccaatcaggagcttcgtgagggagacgctgaccggcggcagcaagctgagcagcaagcac
ctgggagccctgctggaggtggtgtggagactagtggtcagccagaagacacgagcagct
gtctcagaggagctcctccaggcggtgtatgttcagtaccagcagaggaacctcacagtg
ggagtgcgactcatgctgctacgcttcttcagtcagctctacctaaaggaacgcctaaac
aggagtaagatccttactcgttggctggctgcacttcctgtccagctggtgcagttgggc
tccaggaaccctcagctgtcggcgcaggtcctgcaaacgctgcagcacgcagcggcccgg
aacaacaaagagctgctgagcagcctgcagatgcatgcatgcaacctctatgaccctcag
gagggctgtgtggtggtgctgcccgtggagtcccagcagcgcctggtgcagatgctctac
ttcctgccagcgttcccccccgagctgctgtcctgcctcagccgggtctgcaacacgggc
cgcgtctctgctggcctggccgctacgctgatccgcatcatacacctgagatcttctcta
agtggatggacaagtaactcccaggaggctgcggttcgggatggggattaccttagcttc
ctgttctccacccttacaggcttctcctccgatgagctggcggtgctgcagcaggctgat
gaggatgccttgtctccgccctctcctctctcccccttcagcatctaccccacccccctg
gagcagttcacacaccactgggatatcgtggaggaagtgtgtcactgcttatcgacattg
ggctccaactctcagtgctttgatattctccagaacggtatctgcaagaacctggtgggt
ttgaccgtcctgcctgacagtgtgtgtgcggcggtcctgagggtggtcgctcgcctgctg
gatctcagtttcctgcccagcgacacactcttgcacttcctgtctgactgctgtctgagc
atgctcagtctgctcctgcagctagaacacagtgcacacaaaagggaggcggtgtggggg
gcgtgtctggcggcgctgagcagcgtgccccggctgctgcgtctgctgctgcagtcgctg
cgtgtgtgtgacatgtgtgaggaggagttccctcagctggcgcagatcctctcgctcctc
atgcagcacacacacctgcgcaaccacatggtggccaacgcatcgctgctgcagcacatc
atacaggagctcacgcggtactgtgggggcgagtctcgtgagcagtggctgacggacttg
ctctactgctacagtgccacactgtctggtccccgtggtaacctctattaa
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