Clupea harengus (Atlantic herring): 105895597
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Entry
105895597 CDS
T09045
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
105895597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105895597
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105895597
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Eaf7
DUF3915
Motif
Other DBs
NCBI-GeneID:
105895597
NCBI-ProteinID:
XP_031420085
UniProt:
A0A6P8F8H0
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Position
3:complement(2736419..2745080)
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AA seq
853 aa
AA seq
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MPKQQQQQQTRDMELDSLVRQSPLLQPRTPSPSSPTSALELPNIPSYHRLPPIALPRQLS
GLSNPGFHIEDDLPSARHSGSSRLSLHPAVNVEDVDSDGELGKKSHKTPQVINHQGPNLK
TLTVPGVPKPNRSRKQQNIWNKIKKLYSQDNADEDERETAVRAWPSHSSQSSLLSVDEGL
KERPASSASQTSAIVNDRLQELVKLFKERTERAKEKLIDPDESDEDTPPASPAKAAAAPP
VDQKVDEAPPPPPPTQGEEQESTPLCCQGRLGSCLRRMLQYRFPASIDPFTNLVYVLWLL
FVTLAWNWNVWLIPVRWAFPYQTPGNLYLWLLTDYLCDTIYILDILVFQPRLQFVRGGDI
VCDKTEMRKKYMKTFRFKMDVFSLVPLELFYFRTGVNPLLRFPRLLKVMSFFEFNERLEA
ILTKPYFYRVIRTTTYLLYSLHCNACLFYWGSAYQGLGSTQWVYDGKGNSYIRCYYFAVK
TLITIGGLPDPTTLFEIVFQLINYFVGVFVFSIMIGQMRDVVGAATAGKTYYRSCMDNTV
KYMAAYRIPKEVQNRVKTWYEYTWQSQGMLDEQELLVQLPDKMRLDIAVDVNYSIVSKVA
LFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVFVT
LKAGSVFGEISLLAIGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESQKLLRRKAK
KMLAKDKKPEVKKEAKKERAQVIPPRAETPKLFKAALEMTGKSGLKGALSKLKEKNKSSV
SLQPSLASTLLTPSPTSGQPLEPELDLLSQNSGSSPVTRKTKACQRDNATSSKEQEGLEE
EKENKVKEEKRMK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacaacagcaacagcagcagactcgagatatggagttggacagccttgttcgt
cagtcacccctcctccagccacgcaccccctccccttcgtcccccaccagtgcccttgag
ctgcccaacatcccttcctaccaccgcttaccccccattgcccttcccaggcagctatcc
ggactctccaaccctggcttccatattgaggatgaccttccctccgcacggcactcaggg
agctctaggcttagtttgcaccccgctgtcaatgttgaagatgtagattcagatggagag
ctaggcaagaaatctcacaaaacaccccaagttatcaatcaccagggcccaaacctgaaa
actctgacagtgcctggagtccccaaacctaaccgctcaaggaagcagcagaatatctgg
aacaaaataaaaaaactctactctcaagacaacgcagatgaggatgagagagagactgca
gtccgtgcatggcccagtcacagcagccagagcagcctcctcagtgtggatgaagggtta
aaagaacgaccagcctcctctgctagccagaccagcgctattgtcaatgatcgcttgcag
gagttagtgaagctgtttaaagagagaacagaacgtgctaaggagaagctcattgatcca
gatgagtcggatgaagatacgcctcctgctagccctgctaaagctgctgctgcgcctcct
gtagaccagaaggtggacgaggcccccccacccccgcccccaacacagggggaggagcag
gaatccactccgctctgctgccaaggcaggctgggatcttgcctaagaagaatgctgcag
taccgtttccccgccagcattgaccccttcacaaatttggtatacgtcctgtggcttctc
tttgttaccttggcgtggaactggaatgtgtggctgatcccggtgcgttgggctttcccc
taccagacaccaggcaacctctacctgtggctgcttacagactatctgtgtgacaccatt
tacatcctggacatcttagtctttcagccccggctacagtttgtgcgtggcggggacatt
gtgtgtgataaaacagagatgcggaaaaagtacatgaaaacctttcggttcaagatggat
gtctttagtctcgttccccttgagttattctactttagaaccggtgtcaatcctctctta
cgtttcccccgactactgaaggtcatgtctttctttgagttcaatgaacgtctagaggct
atcttgaccaaaccttacttttacagagtcatccgtactacgacatatttgctctattcc
ttgcactgtaatgcctgcctgttctactggggttctgcttatcagggcctgggctctacc
cagtgggtgtacgatggaaagggaaacagctacatccgctgctattattttgcagtgaag
acgctgatcaccatcggaggccttccagaccccaccacactgtttgagattgtgttccag
ctcatcaactacttcgttggagtttttgtgttctctatcatgattggtcagatgagggat
gtggttggtgcagcaacagcaggaaaaacctactacagatcctgcatggacaacacagtg
aaatatatggctgcataccggatacccaaagaggtgcagaaccgtgtaaagacctggtat
gagtacacctggcagtctcaaggcatgctcgatgaacaagagctactagtgcagctacct
gacaagatgagactggatattgcagtagatgtaaactactccattgtcagtaaagttgca
ctcttccagggttgtgaccgccagatgatctttgacatgctgaagagcctcagatctgtt
gtctacctgccaggggactatgtctgtaaaaagggagaagtgggtcgagagatgtacatc
atcaaagctggggaggtgcaggttgttggtggtccagacgggaagacagtctttgtcact
ctgaaagccggctctgtgtttggggagatcagcttactggccataggtggagggaaccgg
cgcacagctaatgtcattgcccatggctttgccaacctcttcattctggacaaaaaggac
ctgaatgagattctagtgcattacccggaatctcagaagctgcttcggagaaaagccaag
aagatgctggcaaaggacaaaaagcctgaggtcaagaaggaagcaaaaaaagaaagagcc
caggtcatccctcctcgagctgaaacacccaaactctttaaggctgctcttgagatgaca
gggaagtcaggcctcaagggtgccctttccaaactgaaagagaaaaacaagtccagtgtc
tcacttcagccctccctggcatcaactctgctgacaccttcgcccacctcagggcagcct
ctggaaccagagctcgatcttctgtctcaaaactcagggagctctccagtgactcgcaaa
acaaaggcatgtcaaagggataatgctacctcttccaaggagcaggaaggtttggaagag
gaaaaggagaataaagtgaaggaggaaaaaaggatgaaatga
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