Clupea harengus (Atlantic herring): 105898611
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Entry
105898611 CDS
T09045
Symbol
npnta
Name
(RefSeq) nephronectin a isoform X1
KO
K06824
nephronectin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04512
ECM-receptor interaction
char04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105898611 (npnta)
04518 Integrin signaling
105898611 (npnta)
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Motif
Pfam:
MAM
cEGF
EGF_CA
EGF_DL_JAG
JAG1-like_EGF2
EGF_2
EGF_PEAR1L
EGF
FXa_inhibition
Motif
Other DBs
NCBI-GeneID:
105898611
NCBI-ProteinID:
XP_031429109
Ensembl:
ENSCHAG00000027244
UniProt:
A0A6P8FRL9
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Position
1:25187937..25216226
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AA seq
524 aa
AA seq
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MERDLILWTDWYLKCMFLCTCLFSANSEFDGRWPTQTASSSGLCRYAGRLDCCWGWTRHS
WGHCQPSFVLTLKVVGIKCRAKAVCHPGCKHGQCAGPNKCKCDPGFTGKTCNQDVHICAM
ANCQYGCDMVRGDVHCQCPSPGLHLAPDGRTCVDIDECAAGLAVCPRFHRCMNTFGSYIC
KCFEGFAMQFINGKHQCKAIPKVIIEPPRPRKTPPNNNGKKLPDADLTRITTSQSPVTSP
TKAKSPSTTATTAAPPQRRKTITHKPPVPTRQHQRPTLKTPLVFTPNPHLRPWRPPFSFT
KAPSRTPKVNPTQWPPTSPDTSLDNRISKDFTPKQRGDVHIPRKPGQGNGLGFDFDVELG
NTEEEMGDDPEAGVLSCSFDYGLCGWIKHGEGDTQWAITEYPSGGKYLTLPEVTVKHSGR
GAQLILPPLSPLRSLDFMCLSFQHKLAGHHVGMLQVFVEKGRQHSPAMWGRMGGSGWSSA
QITLWGNKLERIIIKGERRRYRQGEIALDDISLRRGRCSEEHRN
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgacttaatcttgtggacggattggtatctaaaatgtatgtttctgtgcact
tgcttgttctcggccaattcagagttcgatggcaggtggcctacacagacagcatcatcc
agtggactttgtcgatatgctggacgacttgactgctgctggggttggacacgacattca
tggggtcactgccaaccatccttcgtcttaaccctcaaagtagtcgggataaagtgcaga
gccaaagctgtatgccaccctggctgcaagcacggccagtgcgctggccctaacaagtgc
aagtgcgaccctggcttcactggaaagacctgcaaccaagatgtccacatttgtgccatg
gcaaactgtcagtatggctgtgacatggtgagaggagacgttcactgccaatgcccatct
cctggattacatctggccccagacggaaggacatgtgtggatatagatgagtgtgccgct
ggtcttgctgtgtgccccaggttccacagatgcatgaacacctttgggagctacatctgc
aagtgctttgagggctttgccatgcagttcatcaatggaaaacaccaatgcaaagcaata
ccgaaggtgattattgagcctccaagaccccggaaaacaccaccaaacaataacggtaaa
aaactccctgatgctgacctgacgaggatcaccacctcacaatcaccagtgacctcacca
actaaagcaaaatcccccagcaccaccgctactactgcagcgcctccccagcgaaggaag
acaattacccataaaccacctgttcccacgcgtcagcaccaaagacccaccctgaagact
ccattagtgttcacccccaacccacatttgagaccctggaggccaccattctccttcaca
aaggccccctctcgcactcctaaggtcaaccccacacagtggccccctacttcaccggac
acctccttggataacagaataagcaaagacttcacaccaaaacagagaggagatgtccac
ataccacggaaaccaggccagggcaatggactgggttttgattttgatgttgaactggga
aacactgaagaggaaatgggtgatgatccggaggctggtgttctaagttgttcctttgac
tatggcctttgtgggtggattaagcacggggaaggagacacacagtgggcaataacagaa
tatccttcaggtgggaaatatctgactctccctgaagtgactgtgaaacacagtggaagg
ggagctcagcttatcctgcctcctctcagtccactgcggagcctggactttatgtgtttg
tcctttcaacacaagcttgctggccatcatgtgggcatgttgcaggtgtttgtggagaag
ggtaggcagcacagcccagccatgtggggcaggatggggggcagtggctggagctcggcc
cagatcacactgtggggcaacaaacttgaaagaataattataaaaggtgagcggaggcga
tatcgacaaggagagatagctcttgatgacatctctctgagaagggggcgctgttcagag
gagcacaggaactga
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