Clupea harengus (Atlantic herring): 105899052
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Entry
105899052 CDS
T09045
Symbol
tfe3a
Name
(RefSeq) transcription factor E3a isoform X1
KO
K09105
transcription factor E3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105899052 (tfe3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105899052 (tfe3a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
105899052 (tfe3a)
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GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
105899052
NCBI-ProteinID:
XP_031422025
Ensembl:
ENSCHAG00000015756
UniProt:
A0A6P8FE64
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Position
4:10558775..10576393
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AA seq
574 aa
AA seq
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MYALSGSEQKKGEGEKVKVEFYQNVNPMALPGQRVPHDQPQTVFVILDSNTEAMNLISLE
PVLPESGIVADIEVEGILASDSDTFYQLKSQPISLSSSVTPADPAPSLSTTMTSRVLMRQ
ELMRQQARDQERREAQQQANSAQFRLATEATPAISMATILPASRAPAQVPVEVLKVQTHL
ENPTKYHIQQAQRLQVKEYLSHTLGNNVVIQKLGASPSTISGSAPELAPAANSTPSSPMA
VLSLSSAKEEIEDVIEDIISLESSLNDDFITLIDSSLQLPNTLPVSGDLLDVYSSVGMAA
STITASNSCPANLHHVKRELSDAEAKALMKERQKKDNHNLIERRRRFNINDRIKELGALI
PKTIDPGDRDMRWNKGTILKASVDYIRKLQKEQQRAKEMDMRQKKLEHANRSLLLRIQEL
EMQARVHGLSASAVQSSDLLLMQQQLQTTPLEATGADSLSKTLLSLGGASLGQSAASSFL
SEATAVSPGAGGGTLSCTLDLGSLTFSELADDPTASIFHTALMADMGLGDILMDDGIGLA
LSPVGGADPLLSSVSPGASKTSSRRSSFSMEEDL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccctctctggctcagaacagaagaagggcgagggagaaaaagtaaaagtggaa
ttttatcaaaatgtcaatccgatggcattaccggggcagcgggtgccccatgatcaaccc
cagacagtgttcgtgattcttgactcaaatacagaggccatgaacctgattagtttggaa
cctgtccttcccgagtctggcatagtcgcggacattgaagtggaaggcattctcgcgtct
gattctgacaccttctatcagctgaagagccagccgatctctctcagttcctctgtgacc
ccagctgacccggcgccgtctctcagcaccaccatgacgtcgcgggtgctgatgcggcag
gagctgatgcgacagcaggcgcgcgaccaggagcgtcgtgaggcccagcagcaggccaac
agcgcccagttccgccttgccactgaggccacgcccgccatctccatggcaactattctg
cccgcctccagagcccccgcgcaggtgcccgtggaggtgctgaaggtgcagactcatctg
gagaaccccaccaagtaccacatccagcaggcccagcggttgcaggtgaaggagtacctc
tcccacacgctgggcaacaacgtggtcatccagaagcttggggcctccccatccaccatc
tcgggctccgcccccgagctggcccccgcagccaatagcacgcccagcagcccgatggct
gtgctcagtctcagctccgccaaggaagagattgaagacgtcattgaggacatcatcagt
ttggaatccagtttgaacgatgacttcatcacgttgatcgattccagcttgcagcttccc
aacacgctgccagtctcgggggacctcctggatgtgtacagcagcgtggggatggccgcc
tcgaccatcaccgccagcaactcctgccccgccaacctgcaccacgtcaagagagaactg
tcggatgcagaggccaaagcacttatgaaggagcggcagaaaaaggacaaccataacctc
attgagcgccggagacggtttaacatcaacgaccgcatcaaggagctaggtgctctcatc
cccaagacaattgacccgggggacagggatatgcgctggaacaagggcaccatcctgaag
gcttctgtggactacatccgaaagctgcagaaggagcagcagcgggccaaggagatggat
atgaggcagaagaagctggagcacgccaaccgcagcctgctgctccgcatccaggaactg
gagatgcaggcccgtgtccacggcctctctgcctccgcagtgcagagctcagacctcctc
ctgatgcagcagcagctgcagacgacgcctctggaagccacgggggccgacagcctgtcc
aagaccctgctcagcctgggcggggcatcgctgggccagtcggccgcctcctccttcctg
tcggaggccacggccgtgtccccaggggccggcggcggcaccctgagctgcacactggac
ctgggctcgctcaccttcagcgagctggccgacgacccgaccgcctccatcttccacacg
gcgctcatggccgacatgggcctgggcgacatcctgatggacgacggcatcgggctggcg
ctctcgccggtagggggcgccgacccgctcctctcctccgtctcgccgggcgcctccaag
accagcagccgcaggagcagcttcagcatggaggaggacttgtga
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