Clupea harengus (Atlantic herring): 105900400 Help Entry 105900400         CDS       T09045                                  Symbol si:dkeyp-50d11.2 Name (RefSeq) calpain-1 catalytic subunit   KO K01367   calpain-1 [EC:3.4.22.52] Organism char  Clupea harengus (Atlantic herring) Pathway char04141   Protein processing in endoplasmic reticulum char04210   Apoptosis char04217   Necroptosis char04218   Cellular senescence char04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     105900400 (si:dkeyp-50d11.2)  09140 Cellular Processes   09143 Cell growth and death    04210 Apoptosis     105900400 (si:dkeyp-50d11.2)    04217 Necroptosis     105900400 (si:dkeyp-50d11.2)    04218 Cellular senescence     105900400 (si:dkeyp-50d11.2)  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     105900400 (si:dkeyp-50d11.2)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:char01002]     105900400 (si:dkeyp-50d11.2) Enzymes [BR:char01000]  3. Hydrolases   3.4  Acting on peptide bonds (peptidases)    3.4.22  Cysteine endopeptidases     3.4.22.52  calpain-1      105900400 (si:dkeyp-50d11.2) Peptidases and inhibitors [BR:char01002]  Cysteine peptidases   Family C2: calpain family    105900400 (si:dkeyp-50d11.2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C2 Calpain_III EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_7 EF-hand_5 CAPN13-like_C_EFh Kelch_HCF Motif Other DBs NCBI-GeneID:  105900400 NCBI-ProteinID:  XP_012683155 Ensembl:  ENSCHAG00000026163 UniProt:  A0A6P3VWG0 LinkDB All DBs Position 8:15921859..15929461 Genome browser AA seq 704 aa AA seqDB search MEPVFAAGVALRLRSDRDRNDGLGRNDKALKFLGQDFETLRAQCLQSKRLFEDDYFPAKH SSLGFKELGPSSAKAQGVRWLRPTEFCSDPHFIVDGATRTDICQGALGDCWLLAAIACLT LNEPLLHRVVPHGQSFHSDYAGIFHFQMWQFGEWVDVVVDDRLPVRDGKLLFVHSAEGAE FWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELKKAPSNLFSIIQKAVERG SLLGCSIDITGVFDMEAVTFKKLVKGHAYSVTGVEEVEFKGSPTKLIRIRNPWGEVEWTG AWSDDSREWSGLDPSVRSRLYHCSEDGEFWMSFSDFMREFSRLEICNLTPDALQAGQLKK WSTALFPGEWRRGSTAGGCRNYPATFWINPQYKIALSQPDTDSQAGCSFLVALMQRDRRR LRQEGKDMETIGFAIYEVPDECKGQAGMHLRRDFFLRQASKARSELFVNLREVSSRFCLP EGEYIIVPSTFEPQKEGNFVLRVFSEKPADSQELDDELSADMPEEEQLDESQIDEGFKTL FKQLAGQERVITASKLQMILNRVVSKHKDLKTDGFGKEACRCMIALMDTNGSGQLGLTDF HVLWEKVKRYLTIFRKFDLDKSGTMSSYEMRLALESAGFKLTNHLFQLIILRYAKPDLNV DFDNFVTCLIRLESMFKTFKTMDTDADGVVSFNFSQWISLTMFA NT seq 2115 nt NT seq  +upstreamnt  +downstreamnt atggagcctgtgtttgctgcgggagtcgctttgcgcttgcgaagcgacagggaccgtaat gacggtctaggtcggaatgacaaagctcttaagttcctcggacaggactttgagactctg agagctcagtgccttcaaagcaaacgcctgtttgaggatgactacttccctgcaaaacac tcttcacttggtttcaaggagcttggaccgagctcagcgaaagcacaaggggtccgctgg ctgagacccacggagttctgctctgacccacactttatcgtagatggcgctactcgcaca gacatctgccagggagctctgggtgactgctggttgctagcagccattgcatgcctcacc ctgaatgagcccttgctgcatcgggtggtgccccacggacagagcttccacagtgactat gcaggaatatttcacttccagatgtggcagttcggggagtgggtggatgtggtggttgat gacaggctgccggtgagagacggaaagctgctgttcgtccactcagccgagggggcagaa ttctggagcgcactgctggagaaagcttatgcaaagcttaacggctgttatgaagccctg tctggtggctccacctctgagggcttcgaggacttcaccggcggggtgacggagatgttc gagctgaagaaggcgccctccaacctcttcagcatcatccagaaagcggtggagagaggc tcactgctcggctgctccatcgacatcactggcgtctttgatatggaagcggtcaccttt aagaagttggtgaagggccatgcctactctgtcacaggagtggaggaggtggagttcaag gggagcccgaccaaactgatacgcatccgcaacccctggggagaagttgagtggacagga gcctggagtgacgactcacgagagtggagtggtcttgatccatctgtccgatccagacta tatcactgcagtgaagatggagaattctggatgtcctttagcgacttcatgcgggagttc agtcggctggagatctgtaatctaacaccggatgccctccaggcgggtcagctgaagaag tggagcacggcgctgttcccaggagagtggagaagaggcagcacagctggaggctgtagg aattatccagcaacattctggatcaatcctcaatacaaaatagccctctcgcagccagat actgacagccaggcagggtgtagctttctggtagccctgatgcagagggatcgccgtcgg ttacgtcaggagggcaaggacatggagaccattggattcgcgatatatgaggttcctgat gagtgtaagggtcaggcggggatgcacctgaggcgggacttcttcctgaggcaagcttcc aaagctcgctccgagctcttcgtcaacctgcgtgaggtcagctcccgcttctgcctcccg gagggcgagtacatcatcgtcccgtctacctttgaaccccagaaagagggaaactttgtg ctgagggtgttctctgagaaacctgccgactcccaggagctggatgatgaactgtcagca gacatgcctgaggaggaacagcttgatgagagtcagattgatgaaggcttcaaaaccctt ttcaagcagctggctggacaggaaagggtgatcaccgcatccaagttgcaaatgatcttg aacagggttgtaagcaaacataaagacctgaaaacagatgggtttggaaaggaggcttgc cgctgtatgatagccctcatggacactaatggcagtggacaactgggtctgacggacttc cacgtgctctgggagaaagtcaaaagataccttactatattcaggaagtttgacttggac aagtctggcaccatgagctcctatgagatgcgtctggcattggagtctgcaggtttcaag ttgactaatcacctcttccagctgataattctgcgctacgccaagccagaccttaatgtg gattttgataacttcgtcacctgcctcattcggttggagtctatgttcaagaccttcaaa acaatggacactgatgctgatggagtggtgtccttcaacttctcccagtggatctcgctc accatgtttgcctga

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