Clupea harengus (Atlantic herring): 105900599
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Entry
105900599 CDS
T09045
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105900599 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105900599 (ss18)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105900599 (ss18)
GBAF(ncBAF) complex
105900599 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
105900599
NCBI-ProteinID:
XP_012683387
Ensembl:
ENSCHAG00000026788
UniProt:
A0A6P3VWV2
LinkDB
All DBs
Position
25:complement(11303322..11314657)
Genome browser
AA seq
374 aa
AA seq
DB search
MSVAFAPHRPRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMPGGMNQSGPPPQAPHGHNMPSEGPPAPHMQNQMNG
QMPGPNHMPMQGPGPNQPPNMPSGPMNMPPSSHGSMGGYNHAVPSSQGMPTQGQMNMSQG
QPMANYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMMGQVNQGNH
VMTQRPMPPYRPPQQGPPQQYPGQEEYYGEQYSHGSQGAPEGSSQYGQQQEAYQQGPPQQ
QGYPPQQQYPGQQGYPGQQQGYGPSQGGPGQYPNYPQGQGQQYGAYRAPQPGPPQAQQQR
PYGYDQGQYGNYQQ
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacagaccgcgtggaaagggtgatataacacccgcagga
attcaaaagttactggatgagaacaaccaactaatacagtgcataatggacttccagagc
aaaggaaagacggccgaatgttcacaatatcaacagatgcttcacagaaatctggtgtac
ttggccacgatagcagactccaatcagaatatgcagtctcttcttcctgctccccccacc
cagaacatgcccatgccgggtggcatgaaccagagcggcccccctccccaggctccccac
ggccacaacatgccctcggagggcccacctgccccacacatgcagaaccagatgaatgga
cagatgcctggccctaaccacatgcccatgcagggtcctgggcccaaccagccgcccaac
atgcccagtggccccatgaatatgccccccagcagccacgggtccatgggcggctacaac
cacgctgtgccctcctcacagggcatgcccactcaaggccagatgaacatgagccaaggc
cagccgatggcaaactacggcccacgacccaacatgaacatgcagcccaaccaaggcccc
atgatgcaccagcagccaccctcccagcagtacaacatgccccctggtggtggtgggcag
cactaccagggccagcagaatcccatgggcatgatgggccaggtgaaccagggcaaccac
gtgatgacccagagacccatgcccccctacaggccgccacagcaaggtcctcctcagcag
tacccaggtcaggaggagtactatggggaacagtacagtcatggcagccagggagctcct
gaaggaagttcccagtatggccagcagcaggaggcctaccagcagggtccccctcaacag
cagggttacccaccccagcagcagtatcctggacagcagggctatcccggtcagcagcaa
ggctatggcccgtctcaaggaggccctggacagtatcccaactaccctcagggccagggt
cagcagtacggggcctacagggcaccgcagccaggccccccacaagcccagcaacagcgt
ccatatggctatgaccagggtcagtatggaaactaccagcagtga
DBGET
integrated database retrieval system