KEGG   Clupea harengus (Atlantic herring): 105900599
Entry
105900599         CDS       T09045                                 
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105900599 (ss18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    105900599 (ss18)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    105900599 (ss18)
   GBAF(ncBAF) complex
    105900599 (ss18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 105900599
NCBI-ProteinID: XP_012683387
Ensembl: ENSCHAG00000026788
UniProt: A0A6P3VWV2
LinkDB
Position
25:complement(11303322..11314657)
AA seq 374 aa
MSVAFAPHRPRGKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSQYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMPGGMNQSGPPPQAPHGHNMPSEGPPAPHMQNQMNG
QMPGPNHMPMQGPGPNQPPNMPSGPMNMPPSSHGSMGGYNHAVPSSQGMPTQGQMNMSQG
QPMANYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGGGQHYQGQQNPMGMMGQVNQGNH
VMTQRPMPPYRPPQQGPPQQYPGQEEYYGEQYSHGSQGAPEGSSQYGQQQEAYQQGPPQQ
QGYPPQQQYPGQQGYPGQQQGYGPSQGGPGQYPNYPQGQGQQYGAYRAPQPGPPQAQQQR
PYGYDQGQYGNYQQ
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgtcggtggcgtttgcacctcacagaccgcgtggaaagggtgatataacacccgcagga
attcaaaagttactggatgagaacaaccaactaatacagtgcataatggacttccagagc
aaaggaaagacggccgaatgttcacaatatcaacagatgcttcacagaaatctggtgtac
ttggccacgatagcagactccaatcagaatatgcagtctcttcttcctgctccccccacc
cagaacatgcccatgccgggtggcatgaaccagagcggcccccctccccaggctccccac
ggccacaacatgccctcggagggcccacctgccccacacatgcagaaccagatgaatgga
cagatgcctggccctaaccacatgcccatgcagggtcctgggcccaaccagccgcccaac
atgcccagtggccccatgaatatgccccccagcagccacgggtccatgggcggctacaac
cacgctgtgccctcctcacagggcatgcccactcaaggccagatgaacatgagccaaggc
cagccgatggcaaactacggcccacgacccaacatgaacatgcagcccaaccaaggcccc
atgatgcaccagcagccaccctcccagcagtacaacatgccccctggtggtggtgggcag
cactaccagggccagcagaatcccatgggcatgatgggccaggtgaaccagggcaaccac
gtgatgacccagagacccatgcccccctacaggccgccacagcaaggtcctcctcagcag
tacccaggtcaggaggagtactatggggaacagtacagtcatggcagccagggagctcct
gaaggaagttcccagtatggccagcagcaggaggcctaccagcagggtccccctcaacag
cagggttacccaccccagcagcagtatcctggacagcagggctatcccggtcagcagcaa
ggctatggcccgtctcaaggaggccctggacagtatcccaactaccctcagggccagggt
cagcagtacggggcctacagggcaccgcagccaggccccccacaagcccagcaacagcgt
ccatatggctatgaccagggtcagtatggaaactaccagcagtga

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