Clupea harengus (Atlantic herring): 105901727
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Entry
105901727 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: caskin-1
KO
K21952
CASK-interacting protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105901727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105901727
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
105901727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Caskin-tail
Caskin-Pro-rich
SAM_1
SAM_2
Ras
Roc
RsgA_GTPase
DUF8489
Motif
Other DBs
NCBI-GeneID:
105901727
NCBI-ProteinID:
XP_042559123
UniProt:
A0A8M1KA58
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All DBs
Position
23:23501628..23527478
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AA seq
987 aa
AA seq
DB search
MSYPEREEKMEYTSGVEVADDAEVLYPEVADDAEVLYPDSAYGSSAVDTDDTEGSKTQST
LTLTYDEDLVHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTVSTATVTLFIT
LMIMLFMLPLILFIADHFQPASWEIKNSADLGEWLSAIGLPQYHKKLSENGYDSITIVRD
LTWEDLQEIGIDKLGHQKKLMLAVKKLCDINRCQLQAELAGGGTLRRKHPPSLHLLAIEP
CEGGGGGAGLVSGGDMLSFQDSELSAELQSAMSRPYGAGHHGDDAAIVMAAAAAAAAASA
SLGLGRASGGLSHSEESLDARSRGSGRSAGGDTTHPSRSRESLSSSEASSPGRERNLPEG
HSAHPHTPTHTHPHTPTHTHPHTPTHTHPHTPTHTHPHTPTHTHPHTPTHTSSAKAALSN
KYPAPQPPAKPKAQSAIAMATGMPGAAHRGFSYLAGGLSGSATLERGGLSRGGRSQSLTR
YALSDGEPDDDDDEDYSPSPPSCAVPSYATLSRRPGRHHVSRLQSAPEGSGHASNSSSSA
SSPVGRSQSFAVRTRRKGPPPPPPKRLSSVSSSETTETEASSPSPATSPESLGGVSMETG
LPGGVRDAVANLETAKAIASAAATHTQDTHARTHTPTHTPTHTPTHTHLHPSPDPSQPPR
RRALSQGQSGAAPPQDVSQSEQRAAKSDSEEEELNGSGGSPQNSSSECIPFAEEGNLTIK
QRPKVGGPLRPESTEPKTPDLLPDPPDPPEFNLKESDTVKRRHKPKETVAAETIAMEMAA
AAAGGERKRGSSPRMSESDATSSDLEVTWSDSEAPHTHSHTHSQHNTHTHSLAPPGTMGS
PGKQPPPPVRPKPPRSPSPRLQNSPTPTVGSPTMLVNMQQSVAFSSPALTPVPSPPPPPA
GVPVLQAARPGKPQASEPGPGPRPEEAQQRLEKTSTSLEAALKAVEQKLIQDNTHSGPLV
VKSAGNILDDIGNMFDDLADQLDAMLD
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatccagagcgcgaggaaaaaatggagtacacttcgggagtggaggttgcggac
gatgccgaagtattatacccggaggtggcggacgatgccgaagtattatacccggacagc
gcgtacgggtcctccgccgtggacaccgacgacaccgagggcagcaagacgcagtccact
ctcacgctcacctacgacgaagacctcgtgcataagactatcctggttggggacagtgga
gtggggaagacttctctcctggtgcagtttgatcagggcaagttcatcccaggatccttc
tctgcgactgttggtatcggctttacagtgagtacagccacagttactctgtttataact
ttaatgatcatgctgtttatgctgccactcatcctcttcatagcagatcatttccaacca
gccagctgggagattaaaaacagtgctgacctgggggagtggttgagtgccatcggtctg
ccccagtaccacaagaagctgtcggagaacggctacgactccatcaccatcgtcagggac
ctcacctgggaggacctgcaggagatcggcatcgacaaactgggccaccagaagaagctg
atgttggcggtgaagaagctgtgtgacatcaacaggtgtcagcttcaggcggagctggcg
gggggggggacgctgaggcgcaagcaccccccctctctgcacctgctggccatcgagccc
tgcgagggggggggcgggggggcggggctggtctccgggggcgacatgctcagcttccag
gacagcgagctgagcgccgagctgcagagcgccatgagcaggccttacggcgcgggtcac
cacggcgacgacgccgccatcgtcatggcagcagcagcagcagcagcagcagcgtcggcg
tcgctgggcctcggccgcgcctcgggggggctctcgcacagcgaggagagtctggacgcg
aggtcgcgcgggtcgggtcgctccgccgggggggacacaacgcaccccagccgctcccga
gagagcctgtccagctccgaggcaagcagccccggccgggagcggaaccttccggaaggc
cacagcgcacacccacacacccccacgcacacacacccacacacccccacgcacacacac
ccacacacccccacgcacacacacccacacacccccacgcacacacacccacacaccccc
acgcacacacacccacacacccccacgcacacgtcgtccgccaaggccgccctctccaac
aagtaccccgcgccgcagccgcccgccaagcccaaagcccagagcgccatcgccatggcg
acggggatgcccggagcggcccaccggggcttcagctacctggcgggggggctgtcgggc
agcgccacgctggagagggggggtctgtcgcgggggggtcggtctcagagcctgacgcgc
tacgcgctgtcggacggggagccggacgacgacgacgacgaggactactctccgtcgccc
cctagctgcgcggtgccgtcctacgccacgctgagccgacgccccggccgccaccacgtg
tcccgcctccagtccgcccccgagggctcgggccacgcctccaactcctccagctccgcc
tcctcgccggtggggcgcagccaatcgtttgccgtccgcacgcggcgcaagggtccgccc
cctccgccccccaagcgcctcagctccgtcagcagcagcgaaaccacggagacggaggcg
tcatcgccgtcgcccgccacctcgcccgagagcctgggaggggtttccatggagacaggg
ctccccgggggggtgcgtgacgcggtggctaacctggagacggccaaagccatcgccagc
gcagcggccacacacacacaggacacacacgcacgcacacacacccccacacacacaccc
acacacacccccacacacacacatctgcatccctcgcctgacccctcccagcccccccgc
cgtcgggccctcagccagggccaatccggcgccgcccccccacaggacgtcagccaatca
gagcagcgcgcggccaagtcggactcggaggaggaggagctaaacgggtcgggggggtcg
ccccagaacagctccagcgagtgcatcccgttcgccgaggagggcaacctcaccatcaag
cagcgccccaaagtgggggggcccctacgccccgagagcacggagcccaagacccccgac
ctcctccccgacccccccgacccccccgagttcaacctcaaggagtccgacaccgtcaag
aggaggcacaagcccaaggagaccgtcgctgcggagaccatcgccatggagatggcggcg
gcagcggcgggcggcgagcggaagcgggggtcgagtccgaggatgagcgagtcggacgcg
acgtccagcgacctggaggtgacctggagcgactcggaggctcctcacacacactcgcac
acacactcacaacacaacacacacacacactcgctggctccgcccggcacgatgggatcg
ccagggaaacagccccccccgcccgtcaggcccaaacccccccgctccccctcaccacgc
ctccagaacagccccactcccacagtggggagcccgactatgttggtgaacatgcagcag
agtgtggccttcagcagtccagccctaaccccagtaccgtcccctcctcctcccccagcg
ggggtgcctgtgctccaggcagcacggccaggaaagccccaggcttcagagccaggccca
ggcccgaggcccgaggaggcccagcagaggctggagaagaccagcacctcactggaggcc
gcactcaaggcagtggaacagaaactcatacaggacaacacacacagtggcccgctggtg
gtgaagtccgccgggaacattctagacgacatcggcaacatgttcgacgacctggccgac
caactggacgccatgttggactaa
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