KEGG   Clupea harengus (Atlantic herring): 105902954
Entry
105902954         CDS       T09045                                 
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04141  Protein processing in endoplasmic reticulum
char04210  Apoptosis
char04217  Necroptosis
char04218  Cellular senescence
char04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105902954 (capn1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    105902954 (capn1)
   04217 Necroptosis
    105902954 (capn1)
   04218 Cellular senescence
    105902954 (capn1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    105902954 (capn1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:char01002]
    105902954 (capn1)
Enzymes [BR:char01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     105902954 (capn1)
Peptidases and inhibitors [BR:char01002]
 Cysteine peptidases
  Family C2: calpain family
   105902954 (capn1)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_5 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh
Other DBs
NCBI-GeneID: 105902954
NCBI-ProteinID: XP_031440973
Ensembl: ENSCHAG00000017230
UniProt: A0A6P8GQH4
LinkDB
Position
18:26000065..26047440
AA seq 704 aa
MEPAFAMGMAAKLRSQWDRDQGLGQNHNAVKFQGQDFESLRARCLQTRALFEDPLFPAQA
SSLGFNELGPRSSKTQGTRWMRPTEICSRPQFIMDGATRTDICQGALGDCWLLAAIASLT
LNENLLNRVVPHGQSFSSGYSGIFHFQFWQFGEWVEVVIDDRLPVKDGKLLFVHSAEGGE
FWSALLEKAYAKLSGCYEALSGGSTSEGFEDFTGGVTEMFELRKAPSDLYSIMGRAIERG
SLLGCSIDITSSRDQEAVTFKKLVKGHAYSVTAVDEVVYRGNPTKLVRIRNPWGEVEWTG
AWSDNSSEWEKVDRSVRGRLQNRSEDGEFWMSFSDFLREFNRLEICNLTADALQASNLKK
WSTSLYQGEWRRGSTAGGCRNFPATFWINPQFKISLQHPDVSGQSDCSFLVALMQKDRRR
KRKEGKDMETIGFAVYEVPNEYRGRSGVHLKRDFFLTHGSSARSELFINLREVSTRCSLP
AGEYIIVPSTYDPNKEADFVLRVFSEKPANSEELDDNVTADLPTETKLDEAQIDQGFKSL
FRQLAGADNEISGTELQTILNRIIAKHKDLKTDGFTEEACRSMINLMDTDGSGKLGLTEF
HVLWEKIKRYLTVFRQFDLDKSGTMNSYEMRMALESAGFKLTNHLFQLIILRYTEEDLTV
DFDNFVTCLIRLETMFKTFKTMDTDADGVISLNFFQWISLTMFA
NT seq 2115 nt   +upstreamnt  +downstreamnt
atggagccagcgttcgccatggggatggctgctaagcttcgcagccagtgggaccgggac
cagggtttgggccagaaccacaacgccgtcaagttccaggggcaggacttcgagtcgctg
cgggcccgctgtctccagacccgggcgctgttcgaggacccgctgttccccgcgcaggcc
tcctctctgggcttcaacgagctgggcccgcgctcctccaagacccagggcacgcgctgg
atgaggcccacggagatctgttctcggccccagttcatcatggacggagccacgcgcaca
gatatctgccagggagcgctgggtgactgctggttgctggcagccattgcctctctgact
ctgaatgaaaaccttctgaaccgcgtcgtgcctcatggccagagcttcagcagtgggtac
tccggaatcttccacttccagttctggcagtttggagagtgggtggaggtggtgattgac
gacaggctgccggtgaaggacgggaagctgctgttcgtgcactcggccgagggaggagag
ttctggagcgccctgctggagaaagcctacgccaaactgagcgggtgctatgaggcgctg
tcgggcgggagcacgtctgagggttttgaagacttcacgggcggcgtgacggagatgttc
gagctccgcaaggctccgtcggacctgtacagcatcatggggcgagccatagagagaggc
tccctgctgggctgctctatagacatcaccagcagtcgggaccaggaggctgtgaccttc
aagaagctggtgaaaggtcacgcatactcagtgacagctgtggacgaggtggtgtacaga
gggaacccgactaaactggtgcggatccggaacccctggggagaggtggagtggaccgga
gcctggagtgacaactcaagtgaatgggagaaggtggaccgatcagtcagaggccgtcta
cagaaccgtagtgaggatggagagttctggatgtcgttcagtgatttcctgcgtgagttc
aaccgtctggagatctgcaacctgacggcggacgccctgcaggcgagtaacctgaagaag
tggagcacgtccctctaccagggcgagtggaggagggggagcactgccgggggctgcagg
aacttcccagccactttctggatcaatccgcagttcaagatctccttgcagcatccggat
gtgagcggccaatcagactgcagcttcctggtggcgctcatgcagaaggatcgccgtcgg
aaacggaaggagggcaaagacatggagaccatcggattcgccgtctatgaagttcccaat
gagtatcggggtcgctccggcgtgcacctgaagcgagacttcttcctgacgcatgggtcc
agcgcccgctccgagctcttcatcaacctgagggaggtgagcacgcgctgcagtctgccc
gcgggggagtacatcatcgtgccctcgacctacgaccccaacaaggaggcagacttcgtc
ctcagggtcttctccgagaagcccgccaactctgaggagctggatgacaacgtcactgca
gatcttcccactgagactaagttggacgaggctcagattgatcaaggattcaagagcttg
ttcagacaactagctggcgcagacaacgagataagtgggacagaactgcaaaccattctc
aaccgtatcatagccaaacataaagacctgaagactgatggctttactgaagaggcctgt
cgcagtatgatcaacctgatggatactgatggtagtgggaagttgggcctgactgagttc
catgtgttgtgggagaagatcaaacgctacctgactgtgttcagacagtttgacctggat
aagtcaggcaccatgaactcttatgagatgcgcatggccctggagtctgcaggcttcaag
ctgaccaatcacctgttccagctgatcatcctgcgctacactgaagaggacctcaccgtc
gactttgacaactttgtcacctgtttgatccgcctggagaccatgttcaaaacgttcaag
acgatggacacagatgcggacggggtcatctccctcaacttcttccagtggatttccctc
actatgttcgcctag

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