Clupea harengus (Atlantic herring): 105903509
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Entry
105903509 CDS
T09045
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105903509 (znf827)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105903509 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_5
zf-H2C2_2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_6
zf-C2H2_ZNF462
zf-C2H2_jaz
HVO_2753_ZBP
Motif
Other DBs
NCBI-GeneID:
105903509
NCBI-ProteinID:
XP_031415101
Ensembl:
ENSCHAG00000008983
UniProt:
A0A6P8ES03
LinkDB
All DBs
Position
22:complement(6015312..6063484)
Genome browser
AA seq
1525 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDSVSEGGPEAAAAEDDGWYGNASDTPSDSSYGDVRPDELRTSPD
AGSGPARPELSDTPASEGSLGCPTPIQRASLELLGLEGAVLNAQDSLSSVVSSLYGDASA
HALGKPLSSNLRRLLESGSLKLEEAGLLGRVGGGGAAVRGASDSPPVGLALSPSSHHSQQ
LSALARRLANSSGNSANSASASASPVPVTIKQESGGDPFSPSNGTGGTTVAANSGFVWVG
LGDKWPPPSGCSGASGSSLSPDSAIQKLKAAANAVLQDKSAAVASASSVSSSSSSSSSSS
SSVTSSTSMPALGSRGSDDLVRFDAFTSPFSPQSASSTLAALSKKVSERSQQQQQQQTST
AAEHQGPASSFLSLVSMTSSAALLKEVAARAAGNLLADKKDTNLGPGSTDDVKPLVDRNQ
KTPTSTQSMDLLLPPTPKGRIKSSSQAGSPEEGAKPFQCPVCGLVIKRKSYWKRHMVIHT
GLKSHQCPLCPFRCARKDNLKSHMKQVHQHQDRGETFQCDLCPFTSSRHFSLKLHMRCHQ
HFPRSDLKVKEEPVTDNEEGEGSLLGDAGGSGDIAMTEDAEASPSPLSQMDGRLRASPGE
SSNHIHIKEEPQERDVSVLSPFSLCRERPASSTSSLELPRLKASPSGPSAASLFSPDITT
KTATDLLMKLSAANQKESLKGMIRVKEEPGAEPSQSPRAPSFSFCQEGPLGGLKPREEGS
PMLPKSSSLLSQDINVKVASELLMKLSENNKEACSQTCSQKVAVKAEPMEVDPPSDPAPL
HSHLLGFSTLGACEKREPMANLPDTLARPQKDLFSQDISVKMASELLFKLSEKVSKANNN
KDSSTLGINRPYSPFLDDRFRQSPFNTRSKSSSPVEASSSAQALQDSENASEEPENGLSQ
WRLNEQLYPCPVCGKVFGRQQTLSRHLSLHTDERKYKCHLCPYAAKCRANLNQHLTIHSV
KLVSTDTEHLVNAVTGESNDRKSCSFYYSCHVCGFQTELNAQFVSHMSLHVDKEQWMFSL
CCTSCDYVSVDESDIKSHIAAEHSGLSRSPLSETKSTSSSLSALSDSLNSSEGGDATPNS
EELKILLAPPSTGSQSSSGSGSDEKSEKGFECVFCNFVCKTRAMYERHLQIHLITRMFEC
DVCHKFMKTPQQLLEHKKCHTVPTGGLKCPFCVYSTSRPTALECHLKTHCKPEYRCRICQ
SVWADQAELEGHARAHRLGNHYRCEQCGYLSKTANKLIEHVRVHTGERPFRCDRCSYSCK
RKDNLNLHKRLKHAPRQSYSCSLCPFTTTHPFVFSRHLKKHQGGGGGEGSAEEGEAQQGS
SCLGMGMGFGMGMGLGVGREALLLLEEEEAGVGVGGISSGSGGSNSSSPLMSLTASQALQ
SVALSIRCKQQQQRQGQGQGSLPLQHYLSANGLAAPAPQPPALASPWSPRAGSLASSYYE
QYRNCELAHLIPLTTLFTMRRFTPHALPSSSSSSPSPSRSPFSSSPCLSRQGHVSSLHPP
NSPAAASLKHSFLAYLGLTERAKTV
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacctaagcgcctgccttcacatgtggactctgtctca
gagggggggcctgaggctgctgccgccgaggatgatggctggtacgggaacgcctcagac
acgccttcggattcgtcctacggtgacgtgcggcccgacgagctacgcacttcccccgat
gcgggcagcggtccggcgcggcccgagctgtcggacacgccggcgtcggagggctcgctc
ggctgccccacgcccatccagcgcgcctctctggagctgctgggcctggagggggcggtg
ctgaacgcccaggactccctctcctccgtggtgtcctcgctgtacggggacgcctccgcc
cacgccctgggcaaacccctcagcagcaacttgcggcgcctcctcgagtctggctccctc
aagctggaggaggcagggctgttggggcgcgtggggggaggaggagcggccgtaagagga
gcctctgactcccctcctgttggcctggcgctgtctccgtcgtcccaccattcccagcag
ctcagcgccctcgcccgtcgcctggccaacagcagcggtaacagtgcgaactccgcctcg
gcctccgcctcacccgtgcctgtcaccatcaaacaggagtccggcggtgatcccttcagc
cccagcaacggcaccggcggcaccactgtggccgctaacagcggcttcgtctgggtcgga
ctgggcgacaagtggccgccgccctccggctgctcgggagccagcggcagcagcctctct
cccgactcggctatccagaagctgaaggcggcggccaacgcggtgctgcaggacaagagc
gccgccgtggcctcggcctcctccgtgtcctcttcctcctcttcctcctcctcgtcctcc
tcctcagtgacctcctccacctccatgccagcgctaggcagtcgtggctcggatgacttg
gtccgcttcgatgccttcacctccccctttagcccacagtcggccagctccacgctcgcg
gcgctctcgaagaaggtgtcggagcgcagccagcagcagcagcagcagcagaccagcacg
gcagcggagcaccagggccccgccagctccttcctctcgcttgtttcgatgacctcgtcg
gctgctctgctaaaagaggtggcggcgcgagcagcaggtaacctgctggccgacaagaag
gacactaatctgggtccaggctccacagacgatgtgaagcccctagtggataggaaccag
aaaacccccacatccactcagagcatggacctgctgctgccccccaccccgaaaggcaga
atcaagtctagcagtcaagcagggtccccagaggagggagcgaagccatttcagtgcccg
gtgtgtggcctggtcatcaagcgcaagagctactggaagagacacatggtgatccacacc
ggcttaaaaagccaccagtgtcccctctgtcccttccgctgtgctcgtaaagacaatctc
aagtcccacatgaagcaggtgcaccaacaccaggatcgaggggagacgttccagtgtgac
ctctgtccgttcacctcctcccgtcatttcagcctgaagcttcacatgcgctgccaccaa
cacttcccccggtctgacctcaaggtcaaagaggagcccgtcaccgacaacgaggaaggc
gaaggctcattgctaggcgatgccggcggttccggggacattgcgatgactgaagacgcc
gaggcgtccccctcgcctctttcccagatggacggccgtctccgggcgtctcccggcgag
agctccaaccacatccacatcaaagaggagccacaggagcgtgacgtgtcggtgctgtct
ccgttcagcctgtgccgggagcggcctgccagcagcaccagctccctggagctccccagg
ctcaaggccagtcccagcggccccagcgctgcctccctcttcagccccgacatcaccact
aaaacagccacggacctgctcatgaagctctcagcggcgaaccagaaggagagccttaag
ggcatgatccgtgtgaaggaggagccaggggccgaaccctcccagagccctcgggccccc
agcttcagcttctgccaggagggtccgctggggggcctgaagcctcgggaggagggcagc
cccatgctccccaagagcagcagtctgctgagccaggacatcaacgtcaaagtggcctct
gaactcctcatgaagctctcagagaacaacaaggaggcatgttctcaaacatgttcccaa
aaggtggctgtcaaggcggagcctatggaggtagacccaccctctgacccagcacctctc
cattctcacctattgggattcagcactttaggagcatgtgagaagagagaaccaatggca
aacctccccgacacattggcccgccctcagaaggatcttttctcccaggacatatctgtc
aagatggcctctgagctcctcttcaaactgtcagaaaaagtcagcaaagccaacaacaac
aaggacagttccacactgggcatcaacaggccttacagtcccttcctggatgaccgcttc
agacaatcacccttcaatactcgctccaagagctcatcgcctgtagaagccagttcatca
gcgcaggccctacaagactctgagaatgcaagtgaagagccggagaacggtttgtctcag
tggagactgaacgagcagctctacccgtgcccagtgtgtgggaaagtgtttggccgacag
caaactctgtccagacacctgtccttacacacagatgagaggaaatacaagtgccacttg
tgtccatatgccgctaagtgtcgtgccaacctcaaccagcacctgactattcactcggtc
aagctggtgagcacggacactgaacaccttgttaatgcagtgactggggagagcaatgat
cgcaaaagctgctctttctattacagctgccacgtgtgtggttttcagacagagctcaat
gcccagtttgtgagccacatgtccctgcatgtagacaaggagcagtggatgttctcactg
tgctgcacctcttgtgactacgtctctgttgacgagagcgacatcaagtcacatatagct
gccgaacactcgggtctgtctcgtagtcccctgagtgagacgaagagtacgtcctcctct
ctgtccgccctcagtgactctctcaacagctccgaaggcggggacgccacccccaacagc
gaggagctcaagattcttctggccccaccctccaccggcagccaatcaagctctggctca
gggtcagacgagaagtcggagaaaggctttgaatgtgtgttctgtaactttgtgtgtaag
acacgggctatgtatgagcggcaccttcagatccacctgatcacgcgcatgtttgagtgc
gacgtctgccacaagttcatgaagacgcctcaacagctgctggagcacaagaagtgccac
actgtgcccacaggaggactcaagtgcccattctgtgtgtactccaccagcaggcccacg
gccctggagtgccacctgaagacccactgcaagccggagtaccgctgccgcatctgccaa
tcggtgtgggcagaccaggccgagctggaggggcacgcgcgtgcccacaggctgggcaac
cactaccgctgcgagcagtgcggctacctctccaagacggccaacaagctgatcgagcac
gtgcgcgtgcacacaggcgagcggcccttccgctgcgaccgctgcagctacagctgcaag
cgcaaggacaacctcaatctgcacaagcgcctgaagcacgccccgcgccagagctacagc
tgcagcctctgtcccttcaccaccacgcaccccttcgtcttcagccgacacctcaagaag
caccaggggggagggggaggggaaggaagtgcagaggaaggcgaggcccagcaaggcagt
tcttgcctgggcatgggcatgggctttggcatgggcatgggcctgggcgtcgggagggag
gccctgctgctactggaggaggaggaggcgggcgtgggtgtgggcggcatcagcagcggg
agcggcggcagtaacagcagcagccccctcatgagcctgaccgcctcacaggccctgcag
tcggtggccctgtccatcaggtgcaagcagcagcagcagcgccagggccagggccagggc
agcctgcctcttcagcactacctctccgccaacggcctggcagcgcccgcacctcagccc
ccggcgctggcgtctccgtggtcgccgcgcgccggctcgctggcttccagctactacgag
cagtacaggaactgtgagctggctcacctcatccctctcaccacgctcttcaccatgcgc
cgcttcacaccccacgccttgccctcctcctcctcctcctccccctccccctcccgctct
cccttctcctcctccccgtgcctctccagacaggggcacgtgtcatccctccatccaccc
aactctcccgccgccgcatctctcaaacactccttcctggcttacctgggactgacagag
cgcgctaaaactgtctga
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