Clupea harengus (Atlantic herring): 105904332
Help
Entry
105904332 CDS
T09045
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00514
Other types of O-glycan biosynthesis
char00515
Mannose type O-glycan biosynthesis
char01100
Metabolic pathways
Module
char_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
105904332 (pomt1)
00514 Other types of O-glycan biosynthesis
105904332 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105904332 (pomt1)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
105904332 (pomt1)
Glycosyltransferases [BR:
char01003
]
O-Glycan biosynthesis
O-linked Man type
105904332 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
105904332
NCBI-ProteinID:
XP_031440762
Ensembl:
ENSCHAG00000024821
UniProt:
A0A6P8GZ79
LinkDB
All DBs
Position
18:complement(210416..226673)
Genome browser
AA seq
722 aa
AA seq
DB search
MFSFHKLPITFKIEINVLLLVVTFLGLLTRLRGIQFPRAVVFDEVYYGQFVSLYMKQVFF
VDESGPPFGHMILALGAYLGGFDGNFVWNRIGAEYSSNVPVWSLRILPAVAGALCVPLGY
LLMQELGYSHLIALMASVLLLLENSLIVQSRFMLLESILIFFLLLAVVSYLRSCKAPSGS
SIRWVWLTLSGVASACAVGVKYMGLFTYLLLLGLATVHVWQLIGDKSLHLAAVVRQVVTQ
FLALIVLPLGLYLAFFYGHLSLLCHSGPHDQMMSSAFQASLEGGLARITKGQPLEVAYGS
QVTLRGVSSKPVPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPRRQD
LVVSSPPRAVHHGDTIQLLHGMTSRYLNTHDVAAPMSPHAQEVSCYVDFNVSMQVQNLWR
VDILNRESERETWKTILSEVRLVHVNTSAVLKLSGASLPDWGFRQLEVIGDKVYKGYQQN
GMWNVEEHRYGRSHEQKERELELNSPTHIDISYNLSFIARFVELQWRMLSVKAEESEHKY
SSSPVDWITMETNIAYWLHPSNNAQIHLIGNFVTWTMANIALVVYGLMFLVYLLRRRRKI
QDIPEASWSQMVQAGTVCAGGWAVNYLPFFTMEKTLFLYHYLPALTFQILLIPVVLEHIH
SHVLRSPSQRWAFGGVVAAALSAMFLAYHTISPFTYGHVEMTSDQLATLRWKDSWDILLR
KH
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttttcacaagctaccgattacattcaaaatcgagatcaatgttttactgctg
gttgttacatttctcggacttctgaccaggctgcgcgggattcagtttccaagagctgtt
gtgtttgatgaagtttattatggacagtttgtatctctgtacatgaaacaagtgtttttc
gtcgacgagagtgggccaccttttggccacatgattctcgcacttggagcctatctggga
ggatttgatggcaactttgtctggaacagaataggagcagaatactccagtaatgtacct
gtttggagcctgagaatccttcctgccgtggcaggtgctctgtgtgtgccactggggtac
ctgttgatgcaggagttgggttattcccatctcattgctttaatggcgtctgtgcttctc
ttacttgaaaactcactgattgtccagtcccgcttcatgttgctggagtctatcctcatc
ttctttctgctgctggctgtggtgtcctatctgcgctcgtgtaaagctcctagtggttca
tcgatcaggtgggtgtggctgactctgtcaggtgtggccagtgcgtgtgcagttggagtc
aaatacatgggtctgttcacgtacctgctgctgctgggcctggcaaccgttcacgtctgg
cagctcattggagacaagtcattacacttggccgctgttgtgaggcaggttgtgactcag
tttttggccctgattgtgctcccgctgggcctgtacttggccttcttctacggccatctg
agcctcctctgccacagtgggccccatgaccagatgatgagcagtgcctttcaggccagc
ctggagggcgggctggcccgcatcaccaagggtcagcctctggaggtggcgtacggctct
caggtcaccctccgcggcgtctccagcaaacccgtgccgtgctggctccactcgcacaag
gccaactaccccatcaggtatgaaaatggccgtggcagttcccatcaacagcaggtcacc
tgttaccctttcaaagatgtcaacaactggtggatcatcaaagatcccagaagacaagac
ctggtggtcagcagtcctcccagagcggtccatcatggggacaccattcaacttctccat
gggatgacctcgcgctacctcaacacgcatgatgttgctgctcctatgagtccccacgcc
caggaggtgtcttgttacgtggacttcaacgtgtccatgcaggtccagaatctttggaga
gtggatatactgaacagagagtcggagagagagacctggaagactattttatcagaggtg
cgattggtccacgtcaacacatcagccgtgctgaagcttagtggagcttctctgccagat
tggggtttcaggcagctggaggtgattggagataaagtctataagggctaccaacagaat
ggcatgtggaacgttgaggaacaccgctacggaaggagtcatgaacagaaagagagggaa
ctggagctgaattctcccactcatattgacatcagctacaacctcagcttcatcgccaga
tttgtagaactgcagtggcgaatgctgtctgtaaaagctgaggagtcggaacacaagtac
agctcttcacctgtcgattggatcaccatggagaccaacattgcatactggcttcatcct
tcaaacaatgctcagatccacctcattggaaacttcgtaacttggacgatggcaaacatt
gcattggttgtgtatggtctgatgttcttggtatatctcttgagaagacgcagaaaaata
caagatattcctgaagctagctggagtcagatggtgcaggctggaacggtgtgtgctgga
gggtgggcggtgaactatctccccttcttcacgatggagaaaacactctttctttaccac
tacttgccggcactcaccttccagatattactcatcccggtggtgctggaacacatccac
tctcacgtcctcaggtccccatcacagcgctgggcatttggtggggtggtcgcagcagcg
ttgtctgcgatgttcctggcctaccacaccatctcacccttcacctatggtcacgtggag
atgacctcggatcagttggccacgctgcgctggaaagacagctgggatatcctgctgcgt
aaacactaa
DBGET
integrated database retrieval system
