Clupea harengus (Atlantic herring): 105904739
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Entry
105904739 CDS
T09045
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105904739 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105904739 (slc6a11b)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105904739 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
105904739
NCBI-ProteinID:
XP_012688110
Ensembl:
ENSCHAG00000018702
UniProt:
A0A6P3W301
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Position
5:complement(29080735..29096459)
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AA seq
614 aa
AA seq
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MTAEKTIPITNGKPDDAMDAEASNTNLVKSSDQKVNERGHWNNKIEFILSVAGEIIGLGN
VWRFPYLCYKNGGGAFFVPYVIFFICCGIPMFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEGYLNVYYIVILSWAIFYLFNCFTTELPWATCGHEWNTENCVDSRNLSLHNFS
LPHATTPVIEFWERRVLKLSSGIESMGKLRWELAGCLLVAWIICYFCIWKGPKSSGKVVY
VTATFPYVMLLILLVRGVTLPGAAEGIKYYLYPDMSRLSDPQVWVDAGTQIFFSYAICLG
CLTALGSYNPYHNNCYRDCIMLCCLNSGTSFIAGFAIFSVLGFMSYEQGVPIEAVAESGP
GLAFIAYPKAVSMMPLSPLWACLFFLMLIFLGLDSQFVCVESLVTAVVDMYPKTFRVGYR
RELLILGMSVVSFMIGLIMLTEGGMYVFQLFDSYAASGMCLLFVAIFEAIVIGWIYGSDR
FYLNIEDMIGYKPVFFIKWCWKILTPGICTATFLFFLIKYKPLKYNNTYTYPDWGYAIGW
MMALSSMVCIPLGMVIQIWKTEGTFSERIKKLTTPSKSLKMRGRPVPKGQYAVTGNDCDA
KSKISTITEKETHF
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagactattcccataacaaatggaaaacccgatgatgccatggacgca
gaggcttcgaataccaacttagtgaagagcagtgaccaaaaagtgaacgagaggggacac
tggaacaataagattgagtttatactgtcagtcgctggggagattataggacttggcaac
gtgtggaggttcccatatctttgttacaaaaatggaggcggtgctttctttgtgccctat
gtcatcttcttcatctgctgtgggatccccatgttcttcctggagaccgccctgggccag
ttcactagtgaaggggggatcacatgttggagaaaagtctgtccactgtttgagggaatt
ggatatgcaactcaagtcatagaaggttatctgaatgtgtattatatcgtcatcttgtcc
tgggcgatcttctacctatttaactgcttcacaacagagcttccctgggcaacatgtggc
catgagtggaacacagaaaactgtgtggactctcggaacttaagccttcacaacttctct
ctcccccatgccacgaccccagtcattgagttttgggaacggcgtgtgctcaaactgtcc
agtggaattgagagcatggggaagctgcgctgggagctcgctggctgtctgctagtggca
tggatcatctgctatttctgtatatggaaggggcccaaatctagtggcaaggtggtgtat
gtcactgccacattcccatacgtcatgctgctcatcctgctcgtcagaggagtcaccctg
ccaggagctgccgaggggatcaagtactacctctacccagacatgtcacgcctctctgac
ccacaggtatgggtggatgcaggaactcagatcttcttctcctatgccatttgtcttggc
tgcctaacggccctgggcagctacaatccctaccacaacaactgctacagagactgcatc
atgctgtgctgcctgaacagtggcacaagctttatcgctggttttgccatcttctctgtg
cttggtttcatgtcgtatgagcagggggtgccaatcgaagcggtcgctgaatcggggcct
ggactggctttcattgcctatcccaaagctgtgtcgatgatgcccttatctcccctgtgg
gcttgcctcttcttcctcatgctcatcttcctgggtctggacagtcagtttgtatgtgtg
gagagtttggtgacagctgtggtggatatgtaccccaagaccttccgagtgggctaccgc
cgggagcttctgatcttgggcatgtccgtagtgtccttcatgatcggattgattatgctg
acggagggcggcatgtatgtgttccagctgtttgattcatatgcggccagtggaatgtgt
ctgctatttgtggccatctttgaggccatcgtcattggatggatttacggaagtgacaga
ttttacctgaatattgaggatatgattggatacaagccagtctttttcatcaagtggtgc
tggaagattctaactcctgggatatgtactgcaacattcctgttctttctgatcaagtac
aagccactgaagtacaataatacgtacacatatcctgactggggctacgccatcggttgg
atgatggcgctctcctccatggtgtgcattcctctgggcatggttatccagatctggaag
acagaaggcactttctcagagcgtattaagaaactgaccaccccaagcaaatccctgaag
atgcggggaaggcctgtgcccaaaggccaatatgctgtgactgggaatgactgtgatgcc
aaatccaagatctcaaccatcaccgagaaggagacccacttttga
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