Clupea harengus (Atlantic herring): 105908787
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Entry
105908787 CDS
T09045
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04620
Toll-like receptor signaling pathway
char04621
NOD-like receptor signaling pathway
char04622
RIG-I-like receptor signaling pathway
char04623
Cytosolic DNA-sensing pathway
char05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
105908787 (irf7)
04621 NOD-like receptor signaling pathway
105908787 (irf7)
04622 RIG-I-like receptor signaling pathway
105908787 (irf7)
04623 Cytosolic DNA-sensing pathway
105908787 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
105908787 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105908787 (irf7)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
105908787 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
105908787
NCBI-ProteinID:
XP_031421047
Ensembl:
ENSCHAG00000017478
UniProt:
A0A6P8FCU1
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Position
3:complement(26260268..26264305)
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AA seq
439 aa
AA seq
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MQVPVSGGQSSAMHSSNNRPQFGRWLIEQVDSQQFEGLHWLDAQRTKFRIPWKHNSRKDC
NDGDNMIFRAWAVTSGKILENPNDKAKWKTNFRCALSSLKNQFKQLHDNSKDSDNPHKVY
ERIVIADYRNSYENHTVQEFQGNLSYPMIEDIYTDFPPEDILHDDLLSNMITLDLNHQQQ
DPQPWVESYPQNNQVLPTPPVPVESTQPVSQNNSPVPVVQPHYPVLPLPLFWELEISIHY
RRKEMLKTRVSAPLVQLHYQHEIGDLSGQPVCFPSTEGLLDHKQIKFTKRLLESIQRGLL
FEVTQAGIFGTRQGMCKVFASTHHPAESQAEEPRKLVQNAREPLLSYEKFIKDLMDFKEN
KRGSPDYTIYLCFGEKYPDGKPLERKLIVVKVVPLICRELHERAQMDGASSLNSSVSLQI
SHDSLFDLISATFSVPMQE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgccagtttcggggggacagtcttcggcaatgcatagctccaacaacagacct
cagttcggacgctggttgatagagcaggttgacagtcagcagtttgagggcttgcactgg
ctcgatgctcaaagaacaaaattccgcatcccatggaagcacaactccaggaaggactgc
aacgatggagataatatgatcttcagggcatgggcagttaccagtgggaaaattttagag
aacccgaatgacaaagccaagtggaagacaaatttccgctgcgcgctttccagcctcaaa
aaccagttcaaacagttacacgacaactccaaagattccgataaccctcacaaagtgtat
gagcggatcgtcatagctgattatagaaacagctacgaaaaccatacagtgcaagaattt
caggggaacctaagttatcccatgattgaggacatctacacagatttccctcctgaagat
atcctgcacgatgacctgttaagcaacatgatcaccttagacctgaatcaccagcagcaa
gatccccagccttgggttgagagctatcctcaaaacaatcaagtgctgcctaccccacct
gtaccagtggagtccacgcagcctgtctcgcagaataactcacctgtcccagtggtgcag
ccacactatccagttcttcctctgcccctcttctgggagttggagatctccatccactac
cgcaggaaagagatgctgaagaccagggtgtcagcaccactggtccagctccactaccag
catgagatcggcgacctgagcggccagcctgtttgcttccccagcaccgagggcctcctg
gaccacaaacagatcaagttcaccaagcgtctactggaaagcatccagaggggtctcctt
tttgaggtgacccaggctggcatctttgggacccgccagggcatgtgcaaggtgttcgcc
agcacccaccaccctgcagagagccaagctgaggaacccaggaagctggtgcagaacgcc
agggagcccctgctcagttatgagaaattcataaaagacctgatggacttcaaagaaaat
aagcggggatctcctgattacaccatctacctgtgctttggggagaaatatccagatgga
aagcctctggagaggaaactcattgtcgtcaaggtggtgccgctgatctgccgcgagctt
cacgagcgcgctcagatggacggggcctcgtccctcaactccagtgtcagcctgcagatc
tcccacgacagccttttcgacctcatcagcgccaccttcagcgtgcccatgcaagagtga
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