KEGG   Clupea harengus (Atlantic herring): 105908787
Entry
105908787         CDS       T09045                                 
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
  KO
K09447  interferon regulatory factor 7
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04620  Toll-like receptor signaling pathway
char04621  NOD-like receptor signaling pathway
char04622  RIG-I-like receptor signaling pathway
char04623  Cytosolic DNA-sensing pathway
char05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    105908787 (irf7)
   04621 NOD-like receptor signaling pathway
    105908787 (irf7)
   04622 RIG-I-like receptor signaling pathway
    105908787 (irf7)
   04623 Cytosolic DNA-sensing pathway
    105908787 (irf7)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    105908787 (irf7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:char03000]
    105908787 (irf7)
Transcription factors [BR:char03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    105908787 (irf7)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 105908787
NCBI-ProteinID: XP_031421047
Ensembl: ENSCHAG00000017478
UniProt: A0A6P8FCU1
LinkDB
Position
3:complement(26260268..26264305)
AA seq 439 aa
MQVPVSGGQSSAMHSSNNRPQFGRWLIEQVDSQQFEGLHWLDAQRTKFRIPWKHNSRKDC
NDGDNMIFRAWAVTSGKILENPNDKAKWKTNFRCALSSLKNQFKQLHDNSKDSDNPHKVY
ERIVIADYRNSYENHTVQEFQGNLSYPMIEDIYTDFPPEDILHDDLLSNMITLDLNHQQQ
DPQPWVESYPQNNQVLPTPPVPVESTQPVSQNNSPVPVVQPHYPVLPLPLFWELEISIHY
RRKEMLKTRVSAPLVQLHYQHEIGDLSGQPVCFPSTEGLLDHKQIKFTKRLLESIQRGLL
FEVTQAGIFGTRQGMCKVFASTHHPAESQAEEPRKLVQNAREPLLSYEKFIKDLMDFKEN
KRGSPDYTIYLCFGEKYPDGKPLERKLIVVKVVPLICRELHERAQMDGASSLNSSVSLQI
SHDSLFDLISATFSVPMQE
NT seq 1320 nt   +upstreamnt  +downstreamnt
atgcaggtgccagtttcggggggacagtcttcggcaatgcatagctccaacaacagacct
cagttcggacgctggttgatagagcaggttgacagtcagcagtttgagggcttgcactgg
ctcgatgctcaaagaacaaaattccgcatcccatggaagcacaactccaggaaggactgc
aacgatggagataatatgatcttcagggcatgggcagttaccagtgggaaaattttagag
aacccgaatgacaaagccaagtggaagacaaatttccgctgcgcgctttccagcctcaaa
aaccagttcaaacagttacacgacaactccaaagattccgataaccctcacaaagtgtat
gagcggatcgtcatagctgattatagaaacagctacgaaaaccatacagtgcaagaattt
caggggaacctaagttatcccatgattgaggacatctacacagatttccctcctgaagat
atcctgcacgatgacctgttaagcaacatgatcaccttagacctgaatcaccagcagcaa
gatccccagccttgggttgagagctatcctcaaaacaatcaagtgctgcctaccccacct
gtaccagtggagtccacgcagcctgtctcgcagaataactcacctgtcccagtggtgcag
ccacactatccagttcttcctctgcccctcttctgggagttggagatctccatccactac
cgcaggaaagagatgctgaagaccagggtgtcagcaccactggtccagctccactaccag
catgagatcggcgacctgagcggccagcctgtttgcttccccagcaccgagggcctcctg
gaccacaaacagatcaagttcaccaagcgtctactggaaagcatccagaggggtctcctt
tttgaggtgacccaggctggcatctttgggacccgccagggcatgtgcaaggtgttcgcc
agcacccaccaccctgcagagagccaagctgaggaacccaggaagctggtgcagaacgcc
agggagcccctgctcagttatgagaaattcataaaagacctgatggacttcaaagaaaat
aagcggggatctcctgattacaccatctacctgtgctttggggagaaatatccagatgga
aagcctctggagaggaaactcattgtcgtcaaggtggtgccgctgatctgccgcgagctt
cacgagcgcgctcagatggacggggcctcgtccctcaactccagtgtcagcctgcagatc
tcccacgacagccttttcgacctcatcagcgccaccttcagcgtgcccatgcaagagtga

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