Clupea harengus (Atlantic herring): 105909944
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Entry
105909944 CDS
T09045
Symbol
esyt1b
Name
(RefSeq) extended synaptotagmin-1 isoform X1
KO
K28063
extended synaptotagmin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105909944 (esyt1b)
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
105909944 (esyt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
C2_GRDP
SMP_MUG190-like
PROCN
Motif
Other DBs
NCBI-GeneID:
105909944
NCBI-ProteinID:
XP_012694067
UniProt:
A0A6P3WAY0
LinkDB
All DBs
Position
5:complement(366819..392287)
Genome browser
AA seq
1848 aa
AA seq
DB search
MQNAGEDGPKGSDKANTAQSGEDATDSEKTGTPKTPGISAMAVLWTFGKCISALLPVYLA
GYYRMSTSFVVFGLMVYSGWKHSREAKEARLRSAIQFFSNEQEYTTTKIFKSKRDVPAWV
SSSDVEKVEWLNKVLQQAWPFIGQYLEKLLVETIAPAIRGSSNHLQTFNFTKIDMGDKSM
KVVGVKAHTENDKGQVLLDVYISYVGNVEINVEVKRYFCKAGVKGIQLHGMMRVILEPLI
GDVPIVGAVTMFFIRRPKLDINWTGMTNLLDIPGLNVMSDSMIMDIIASFLVLPNRLTVP
LVADLHVAQLRSPLPRGVVRIHLLEAADLVAKDNFMKGMITGMSDPYALIRVGPQCFTSR
HVDNTVCPKWGEMYEVIVHEVPGQELEVEVYDKDTDQDDFLGRAKLDLGIVKKSKLVDEW
FPLKDTKTGRVHFRLEWLTLLANTDKLEEVIKRNSTVPSKFSDPPSAAILAVYLDRAEAL
PIKKGSKEPSPMVQLSVQDTTKESRTCWNTVNPEWEDAFTFFIQDPYKQDIDIQVKDNDR
VQSLGSLSIPLSRLLSRSDLSLDQWFQLESSGQASRIYINTVLRVLWIDEAYLHTPLSSS
DSAATQAAARPKQTTPDANFATEGVLRIHLVGAQNVVAKDKVMGLMKGKSDPYVKIRIGG
KTFKSDVIKGTLNPNWNEMYEVVLTQLPGQEVLLEMFDKDMDKDDFMGRLKIKLSDIISA
QYADQWYTLNDVKSGRIHLIMEWLPTVSKSDQLEQVLQHQTLQAFQNKAVPSAALLFVCL
ERAHDLPMKKSGKEPKAAAELVLGNTSYKTKVCERSSSPQWDESFYFLVRDPNEQRLQVK
LSSNWDQALGSLVLPVRELLSEPELILDQWLSLDGAPASQILLRAELKILGPKMAISDEP
PKASESSVPEKKPEVDTLQGSADTESSPVCVPAATPSAVTVPEEPPATEVISEGDLEVSR
AVDLRPQQTTPDPRFGTEGVLRIHLREAQNLVAKDKVMGLGKGNSDPYVKIHIGDTTFKS
QVVKKNLNPTWNEMYELVLVQNSCQEILFELFDKDMDKDDFLGRLKISMNDIVQAQYTDE
WFTLSDVKSGRLHLTVEWMSTVSQPEGLEKVLQLRSLQSFQNKAVPSAALLFVYLERAHS
LPLKKSGKEPKPAAEIVLGGMSRKTQVCGRSTAPQWEEAFHFPVHDPTEDILIIKLSSNW
DQALGSLVLPVRELLSEPQLVLDQWFKLDGALDDSQILLRAELKILESKVAESAVVEEVS
AEVPDHAVGEEGEEEEEEELREAAETAAPTSGDGLHQLPTESEPETSSLYSEPEEIALAD
VIQDPTPMQTILNPTPEVEDFSQPQDFSNMIGSNSEDMEPIREAQPATAASEEPCPQEPV
EEPEEPSYEKPIPSAPLPAPSAPEEVSEVTSPPALHHQQTSTPVGFGTEGVLRIHLLEAQ
NLVAKDKVMGMGKGKSDPYVKIYIGDMTFKSHVIKENLNPTWNEMYELVLKGNMNLDVKF
EVFDKDLDSDDFLGRFKLRLSDIINSQFTDQWYTLNDIKSGQVHLLLEWLPTASNADKLD
QVLQLPSLQSFQNKAVPSAALLFVYLEMAHSLPLKKSGKEPKPAAELVLGGKGYKTKVCD
RSTSPQWGEAFYFLVHDPKQDMLIIKLSSNWDQALGSLVLPVRELLSEPQLVLDQWFKLD
GALDDSQILLRAELKVLESKLTNTAVAAGALPRGKDVASCGQVKLSLSCGAKEKKLCVTV
HGCRGLVASSKDIMDTYISLILLPDKSKATKRKTGVKRRDLNPEYNERFEFDLSLDEAKH
RTLCVCVKNNAASFMSRDKDVVGQVQIELGQIDLLAGVTEWFDLGEEQ
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgcgggggaagatggacccaaaggctccgacaaggcgaacacggcccagtcc
ggagaagatgccaccgacagcgaaaaaacggggaccccgaagaccccaggaataagcgca
atggccgttctctggactttcgggaaatgtatcagtgccctactgccagtatacttagct
gggtattatcgaatgagtaccagctttgtggtgttcgggcttatggtatattccggatgg
aagcactcacgcgaagctaaagaggcaagactgagatcggccatccagttctttagcaat
gagcaggaatacacaacaacgaaaatatttaaaagtaaacgggacgttcctgcatgggtc
agttcctcagatgttgagaaggtggaatggctgaataaggtgctacagcaggcatggcca
ttcattggtcagtatttggagaagctgttggtagagacgattgctcctgccatacgtgga
tcaagcaaccacctgcagacattcaacttcaccaaaatcgacatgggagacaagtccatg
aaggttgttggggtgaaggctcacacagaaaatgacaaaggtcaagttcttttggacgtt
tacatcagctacgttggcaatgttgagattaatgtggaagtgaaaaggtacttctgcaaa
gcaggcgtcaagggaatccagctacacggaatgatgcgagtcattttggagcctctgatt
ggagatgtgcctattgtgggtgcggtcaccatgttcttcattcgcaggcctaaactggat
attaactggactgggatgaccaatctgctggacattcctggactgaatgtgatgtcagac
tctatgatcatggacatcattgcctcctttctggttcttcccaatcgactgactgtcccg
ctagttgctgacctgcatgttgcccagctccgcagtcctttgcccaggggtgttgtgcgt
atccatctgttggaggctgctgatcttgttgccaaggacaacttcatgaaggggatgata
acgggcatgtccgatccctacgccctgataagggtgggccctcagtgctttacttcccgt
cacgtggacaacacggtgtgccccaagtggggggagatgtacgaggttattgtccatgaa
gtgcctggtcaggagttggaggtggaggtgtatgataaagatacagaccaggatgacttc
ctgggaagggccaagctggatctgggcatagtgaagaaatctaaacttgtggatgaatgg
ttccctctgaaggatactaagacaggccgtgtccacttcaggctggagtggctgactctg
ctggccaacacagacaagctggaggaggttatcaagaggaattctacagtgcccagtaaa
ttcagtgatcctccctctgcagcgatcttggctgtgtatttggatcgagctgaagcactt
cctatcaagaagggcagcaaggagccgagccctatggtgcagctctccgtgcaggacacc
accaaagagagcaggacctgctggaacacagtgaacccagagtgggaagatgcattcact
ttcttcattcaggacccttacaaacaggacatagatatacaggtgaaggataatgaccgt
gtccagtccctgggcagtctgtccatccccctgtctcgcctcctgtcccgttcggatctg
agtctggaccagtggttccagctggagagctctgggcaagccagccgcatctacatcaac
acagtgctcagagttttgtggatagatgaggcgtatcttcacacgcctctcagctccagt
gactccgcggccacccaagcagctgctcgacccaagcagactacgcctgatgccaatttt
gcaacagagggggtgctgcggatccatttggtgggggctcagaatgtggttgctaaggac
aaagtgatggggcttatgaagggaaagagtgacccctatgttaaaatccgcatcggaggt
aagaccttcaaaagtgatgtgatcaaagggaccctcaaccccaactggaatgagatgtat
gaggtggtcttgacccaactgcctggacaggaggtcctcttagagatgttcgacaaggat
atggataaggatgacttcatgggcaggttgaagatcaaactgagtgacattatcagtgca
cagtatgcagatcagtggtacactctgaatgacgtgaagtcaggtcggattcacctgatc
atggagtggctgcccacagtgtccaaatcagatcagttggaacaggtgctgcagcatcag
accctgcaggcgttccagaacaaggccgtcccttctgctgctctgctctttgtgtgtctg
gagcgagctcatgacctgcctatgaagaagagtggtaaagaaccgaaggctgcggccgag
cttgttcttggaaacacgtcctacaaaaccaaggtctgtgaaaggtcctcctctcctcag
tgggatgagtccttttacttcctggttcgtgaccccaatgaacaaaggcttcaggtgaag
ctgtcgagtaactgggatcaggctttgggttctttggtgctgcctgtcagagagctgctg
tctgaaccagagctgattctggaccagtggcttagcctggatggagcccctgccagccag
attctgcttagagcagagctcaagattctgggccccaaaatggccataagtgatgaacca
ccaaaagcttccgagagctctgttccggagaagaagccagaggtggacacacttcaaggc
tctgcagacactgaaagcagtcccgtctgtgtaccagctgccactccttcagctgtgact
gtgcctgaggagccacctgccactgaggtcatttctgagggagacctggaggtcagtcgt
gcagttgaccttcgacctcaacagaccacccctgaccccaggtttgggactgagggcgtg
ttgcgtattcacctgagggaggcccagaatctggtggccaaagacaaagtgatgggactg
ggcaagggtaacagtgacccgtatgtgaagatccacattggggacacaacttttaagagt
caagttgtcaaaaagaacctgaatcctacctggaatgagatgtatgagttggttctggtc
caaaactcctgtcaggagatcctgtttgagctctttgacaaagacatggataaagatgac
ttccttgggaggttgaagatcagtatgaatgacattgtacaggcccagtacacagacgag
tggttcaccctgagcgacgtgaagtcgggccgtctgcatctcaccgtcgagtggatgtcc
actgtatctcagccagaaggactcgagaaggtgctgcagctgcgctctctccagtccttc
cagaacaaggctgtgccctcagctgccctgctctttgtgtacctggagagggcccattcg
ctgcccctgaagaagagtggcaaagaaccaaaacccgccgctgagattgtgcttggaggg
atgtccaggaaaacacaagtgtgtggtcgctcaactgcccctcagtgggaggaagctttt
cacttcccggttcatgaccccacggaagacattctcattatcaagctgtcgagtaactgg
gatcaggctctgggttctttggtgctgcctgtcagagagctgctgtctgaaccacagctg
gttctggatcagtggttcaagctggatggcgccttagacgacagtcagattctactcaga
gctgaactcaagatcctggagtccaaggtggcagagagcgcagttgttgaagaggtgtcg
gccgaagttccagatcacgctgtgggtgaggagggcgaggaggaagaggaggaagagtta
agggaggcagctgagacggccgcccctacatctggtgacgggctgcatcagctgccaact
gagagcgaacctgaaacttcttccctatacagtgaacctgaggagatagcacttgctgat
gtcatacaagacccaacacctatgcagaccattcttaacccaactccagaggtagaagat
ttcagccaaccccaagacttctcaaacatgattggcagtaacagtgaggacatggagcca
atcagagaagcacaacctgccacagcagccagtgaggagccatgcccacaggagcctgta
gaagagccagaggaaccgtcttatgagaagcctatccccagcgctccgctcccagctccc
tctgctcctgaggaagtctctgaggtcaccagtcctcctgccctccaccatcaacagacc
tccactcccgttggctttggcactgagggggtgctgcggatccacctgttggaggctcag
aacctggtggccaaagacaaagtgatggggatggggaaggggaagagtgacccctatgtg
aagatctacattggggacatgacctttaagagtcatgtgatcaaggagaacctcaacccc
acctggaatgagatgtatgagctggttctgaaagggaacatgaacctggatgtgaagttt
gaggtctttgacaaggacttggattcggatgacttccttggaaggtttaagctccggttg
agtgacatcatcaactctcagtttacagaccagtggtacactctaaatgacatcaagtct
ggccaggtccacctgctgctggaatggctgccgactgcatcaaatgctgataagctggac
caggtgctgcagctgccctctctccagtccttccagaacaaggctgtgccctcagctgcc
ctgctctttgtgtacctggagatggcccattcgctgcccctgaagaagagtggaaaggag
ccaaagccagccgctgagcttgtcttgggtggaaagggctacaaaacaaaggtgtgtgat
cgatccacctcccctcagtggggtgaggccttttacttcctggttcatgatcccaagcag
gatatgcttatcataaagctgtcgagtaactgggatcaggctctgggttctttggtgctg
cctgtcagagagctgctgtctgaaccacagctggttctggatcagtggttcaagctggat
ggcgccttagacgacagtcagattctactcagagctgaactcaaggtcttggagtctaaa
ctgactaacactgcagtggcagcaggagctctgcccagaggtaaagatgtggcgagctgc
gggcaagtgaagctctccctctcttgcggagccaaggagaagaaactctgtgtcaccgtc
catggctgcaggggtctggtggcctcatccaaggacatcatggacacctacatctctctt
attctgctgccagataaaagcaaggctacgaagagaaagactggtgttaagaggagagat
cttaacccagaatataatgaaaggtttgagtttgatctctctctggatgaagcgaagcac
aggactctctgcgtctgtgtgaagaacaatgccgcgtccttcatgagcagagacaaagat
gttgtcgggcaggtgcagattgaactgggccagatcgacctacttgcaggcgtgacagaa
tggtttgacctgggggaagagcagtga
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