Clupea harengus (Atlantic herring): 105910110
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Entry
105910110 CDS
T09045
Symbol
smpdl3b
Name
(RefSeq) acid sphingomyelinase-like phosphodiesterase 3b isoform X1
KO
K01128
sphingomyelin phosphodiesterase acid-like 3 [EC:3.1.4.-]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
105910110 (smpdl3b)
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GFIT
Motif
Pfam:
ASMase_C
Metallophos
Motif
Other DBs
NCBI-GeneID:
105910110
NCBI-ProteinID:
XP_012694248
Ensembl:
ENSCHAG00000003169
UniProt:
A0A6P3WBG3
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Position
11:complement(14359594..14364091)
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AA seq
480 aa
AA seq
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MRFPRVSLFVLFIDFQSAAIMNLISRVRTCLIWSVFLVFRGGESSGNFWHITDLHWDPTY
KLGDDPTLVCNSSGSRPAQKAGRFGDYLCDSPWDLINSSIYAMKSILPDPDFILWTGDET
PHVPNEYLGEEAVVSIIGNLTQLIKEVFPTTKVYAALGNHDYHPKSQLPPGQNYIYNQTA
EMWKQWLDPESQSLFKIGGYYTEKLLNRPGYRILVLNTNLYYDQNKATQDIPDPANQFNW
MDTILTNAASQNEKVYIVGHVPPGYFEKKRSKMWFRPNFNERYLELIQKHHAVIEGQFFG
HHHTDCFRMFYSPDGLSPIGTMFLSPGVTPWKTTLPGVVDGANNPGIRTFEYDTDSLLVK
DMVTYYLNLTYANMAQARWEKEYRLTEAFRVPDASPTSMNMILDRMTQESCVLQKYYELN
SVSYDLSACDADCRLDHVCAARGIDEKSYNECLNRAPPNGLFVMLLPVLSATLSIAWSSL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcccgagggtatctctctttgtcctcttcattgattttcagagtgcagcgata
atgaacctcatcagtcgtgtcaggacgtgtttaatttggagtgtctttctggtgttcaga
ggtggtgaatcatcagggaacttctggcacatcactgacctccactgggaccctacttac
aagttgggtgatgatccaacattagtgtgtaactccagcggtagtcgtccagcgcagaaa
gcagggaggtttggggactatctctgtgactcaccatgggaccttatcaactcctccata
tatgccatgaaaagcattttaccagatccagatttcattctttggactggagatgaaact
ccgcatgtgccaaatgagtatcttggggaagaggcagttgtctccataatcggaaacctt
acccagcttatcaaagaagtgttcccaaccaccaaggtgtatgctgctttgggtaaccat
gactaccatccaaagagccagttgccaccgggacagaattatatttataaccagacggca
gagatgtggaaacagtggcttgacccagagtctcaaagtctcttcaaaataggtggatac
tacacagagaagctgctgaatagaccaggatataggatattagtgctcaataccaacctt
tactatgatcagaataaagccacacaggacatcccagatccagcaaaccaattcaactgg
atggacacaatattaacaaatgcagcaagccaaaatgagaaggtatacattgtaggacat
gttcctccagggtactttgagaagaagcgaagtaaaatgtggttccgcccaaacttcaat
gagcgttacctggagctaattcagaagcatcatgccgtcatcgaaggccagttctttggc
caccatcacacggactgtttccgcatgttctacagcccagatggtttatctcccatcggc
accatgttcctgagcccaggggtaacgccatggaagaccactctgccaggggtcgttgat
ggtgccaataaccctggcattcgcacctttgaatatgacacagactctctcctggtcaaa
gacatggtcacctactacctgaacctgacctatgccaacatggcccaggcaagatgggag
aaagagtaccgcctgacagaagccttccgtgtgccagacgcctctcccacctccatgaac
atgatcctggatcgcatgacccaggaatcctgcgtcttgcagaagtactacgagttgaac
tctgtcagctatgacttgtcagcctgtgatgccgactgtcgcctggaccacgtctgtgct
gccagggggatagacgagaagagttataatgagtgtctgaacagagcgcctcctaatggc
ctatttgtgatgctgcttccagtactttctgctacactgagcattgcatggtccagcttg
taa
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