Clupea harengus (Atlantic herring): 105910532
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Entry
105910532 CDS
T09045
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
char04210
Apoptosis
char04217
Necroptosis
char04218
Cellular senescence
char04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105910532
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105910532
04217 Necroptosis
105910532
04218 Cellular senescence
105910532
09144 Cellular community - eukaryotes
04510 Focal adhesion
105910532
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105910532
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
105910532
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C2: calpain family
105910532
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
105910532
NCBI-ProteinID:
XP_031418350
Ensembl:
ENSCHAG00000004617
UniProt:
A0A6P8F2V1
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All DBs
Position
24:12200213..12228053
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AA seq
698 aa
AA seq
DB search
MAGVASNLAKKRALAAGFGTNSNAVKYSNQDFEALRSQCLSQGKLFTDPTFSAAPESLGF
NELGPNSSKTRGVVWKRPGELCSSPQFIVGGATRTDICQGGLGDCWLLAAIASLTLNDDV
MARVVPRDQSFEDNYAGIFHFQFWQFGEWVDVVIDDRLPVKDGELLFVHSAEGSEFWSAL
LEKAYAKVNGCYEALSGGSTTEGFEDFTGGIAEQYDLSKAPANMFYIIKKALESGALLGC
SIDITSAADSEAVTRQKLVKGHAYSLTGVTEVNYRGRKEKLVRMRNPWGQVEWTGAWSDG
SSEWNSVDSSERPSANKEDGEFWMSFTEFLRHWSRIEICTLTPDTITSDDVKHWSVCNYD
GGWRKGSTAGGCRNNPYTFWMNPQFVIKLDEEDDDPDDGVDGCSFLVGLIQKNRRRLRKV
GEDMHTIGFAIYEVPPQFRGQREVHLDKNFFMTHASAARSETFVNLREVSNRFRLPPGEY
LVVPSTFDAHLNGDFCLRVFSEKQSEVLPCDDPVDAVLDDETTSDDDVDANFRALFAKLA
GDDMEISATELKTILNKIVAKRTDIKTDGFSLETSRVMVNLMDDSGNGKLGLGEFATLWK
KVQRYLGIYKQNDKDNSGTMSSPEMRIALKEAGFTLNNTIYQLLVARYAEPDMTVDFDNF
VGCLMRLEMMFRVFKKIDAHDSGSIELDFDQWLTFAMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagtggcatcgaacctggccaagaagcgagccctggcagcggggttcgggact
aacagcaacgccgtgaagtactcgaaccaggactttgaagcgctgaggagccagtgcctg
agccaggggaaacttttcactgatccaactttctccgccgcacccgagtctctgggcttc
aacgagctcgggcccaattcgtccaaaactaggggcgtcgtttggaaaagaccaggagag
ctctgttccagtccacagttcatcgtgggcggagccaccaggactgacatctgtcaggga
ggtctcggtgactgctggctgctggcagctattgcgtctctgacgctcaatgatgatgtc
atggccagagtggtgccccgggaccagagcttcgaggataactacgcaggaatcttccat
ttccagttctggcagtttggcgagtgggtggacgttgtcattgacgaccggttgccagtc
aaagatggggagctgctgtttgtgcactcagccgagggctccgagttctggagcgcccta
ctggagaaggcctacgccaaagtgaatggctgttatgaggccctgtctggcggctccacc
accgagggctttgaggacttcacggggggcatcgcggagcagtacgacctgagcaaggcc
ccggccaacatgttctacatcatcaagaaggccctggagtctggagccctgctggggtgc
tctatagacatcaccagcgctgcagactccgaggctgtcacccgtcagaagttggtgaaa
ggccacgcatactcactcacaggggtcacggaggtgaactaccggggtcgtaaggagaag
ctggtgcgaatgcgtaacccctggggtcaggtggagtggaccggggcctggagtgacggg
tcttccgagtggaacagcgtggattcttcagaacggccgagtgccaacaaagaggacgga
gagttctggatgtccttcactgagttcctgcggcactggtcgcgtatcgagatctgcact
ctgacccccgacaccatcaccagcgacgacgtgaagcactggagcgtgtgcaactacgac
ggaggctggaggaaaggatccaccgcagggggctgccgcaacaacccctacacgttctgg
atgaacccccagtttgtgatcaagctggacgaggaggacgacgaccccgacgacggggtg
gatggctgcagcttcctggtcgggctgatccagaagaaccggcgccgcctgcgcaaggtg
ggagaggacatgcacaccattgggttcgccatctatgaggtccctccacagttccgcggg
cagcgcgaggttcacctggacaagaacttcttcatgacgcacgcgtcggccgcccgctcc
gagaccttcgtcaacctgcgggaggtcagcaaccgcttccgcctgccgccgggcgagtac
ctggtggtgccctccaccttcgacgcccacctcaacggggacttctgcctgcgcgtcttc
tccgagaagcagagtgaagtgctaccctgcgacgatccagtcgatgcagttttggatgac
gagacgacgtcggacgacgacgtggacgctaacttcagagctctgttcgccaagctggcg
ggagacgacatggaaatatctgcaacagagctgaagaccattctaaacaagattgtggcc
aaacgtactgacattaaaaccgacggcttcagcctggagaccagtcgtgtcatggtcaac
ctcatggacgacagtgggaacggtaaactgggcctgggggagttcgccaccctgtggaag
aaagtacagagatacctgggcatctacaagcagaatgataaggataattccggaacaatg
agcagtccagagatgcggatagcgctcaaggaagcaggcttcactctgaacaacactatc
taccagctgctggtggcgcggtatgctgagcccgacatgaccgtcgactttgacaacttt
gtggggtgcctcatgcgtctggagatgatgttcagagtctttaagaagattgatgcccat
gacagtggctccattgaactggacttcgatcagtggctgacgtttgccatgatttga
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