Clupea harengus (Atlantic herring): 105911509
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Entry
105911509 CDS
T09045
Symbol
sema4d
Name
(RefSeq) semaphorin-4D isoform X4
KO
K06521
semaphorin 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
char04090
]
105911509 (sema4d)
CD molecules [BR:
char04090
]
Proteins
105911509 (sema4d)
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GFIT
Motif
Pfam:
Sema
PSI
Ig_2
I-set
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
105911509
NCBI-ProteinID:
XP_012695775
Ensembl:
ENSCHAG00000023640
UniProt:
A0A6P8GGC7
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Position
12:2336556..2376514
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AA seq
881 aa
AA seq
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MAFSVLGVFLGLLLEVSTHGPSSGPRTSWKHEDVNLVEFSEPGVFNYSTLLLSEERHVLY
VGAREAIFELSMKDVSVRKNKVIWKVPETHMEKCIAKGKSKETECLNYIRVLQVLNKDSL
YVCGTHAFQPQCDHLTLKDFKLQEKQEDGRGKCSFDPAQSFTTVMVDGDLYSGTAYNFLG
SEPIISRYSLSQSLLRTEYSTSWLNEPSFVFADVIREGKNSADDEDDKIYYFFTEVSVEY
EFYGKLLIPRIARVCKGDLGGQRTLQKKWTSFLKAKLVCSMPELNFVFNVVHDVFILKTP
DWRETVIYGVFTSQWGNVGLSAVCAYNMSSVEEVFSKGKYMQKATVEQSHTKWVRYNGIT
PSPRPGACINNHNRLQNISNSLHLPDKTLQFVKDHPLLEDPVLPIGNGPRLITKDVNYTQ
IAVERVTALDNNVYDVIFTGTDKGVLHKSVVYEGEVHTVEEIQLLKNAEAIKTLLLSTQG
ARFLYAGSDSGVVQSPTAFCEKYPTCGDCTLARDPYCAWDPQTSACVNIFHNQDVTDLSR
LIQSMTGDADRCPPARRSAPEEYQVMVVKPGSSAELPCPLLSNKAVALWRVNGSVLTDEA
SKFHLLSDTGLLIYSVGPEEQGVYECWSVERAAGKDFSSLVAGYRLRLPVKPRSPGHLPR
SSSSSASTSATVSSGAKLANVPTAPAEGNGITSGPPPLTSALPSSTQQTPSLTPALSSSI
SHTASALQPMPPSSNAPSTKTLDPSAEYLQHDNSNALLFLFLLFFLLFLAALAYNCYMRY
LPAPCLRLRAALLGTQKKAQPEYVACEAGLMETTAEKPELTEQLFQNGAQLRALRDTGYE
TEPECGNCQIPSQGYGDESPPKERPFDVDCVSQPIEYADAD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagtgttctgggagtgtttcttggactgctcctcgaggtctccacacacggc
ccttccagtggtcccaggacatcttggaaacatgaagatgtgaatttggtggagttctct
gagcccggcgtctttaactactcaacgctgctcctgagtgaggagaggcatgtgctgtat
gtgggtgcgagggaggccatcttcgagctcagcatgaaggatgtgtctgtgaggaaaaac
aaggtcatctggaaagttccagaaacacacatggaaaaatgcattgcaaaaggaaagtca
aaagagacagaatgtctgaactacattcgggttttacaagtcctcaacaaagacagtctg
tacgtctgtgggacgcatgccttccagccccagtgtgaccacctgactttaaaagatttc
aagcttcaggagaagcaggaggatgggagggggaagtgctccttcgatcctgcacagagt
tttaccaccgtcatggttgatggagacctgtactcaggaacggcctataacttcctgggg
agcgaacccatcatttccagatactccctgtcccagagtctgttacgcacagagtactcc
acatcttggcttaatgagcccagctttgtgtttgctgatgtcatcagagagggcaaaaac
agtgctgatgatgaagacgataagatctactacttcttcacagaggtgtctgtggaatat
gagttctatggcaagctgctgatccccaggatcgcacgcgtctgcaagggtgacttaggt
ggccagaggacgctgcagaagaagtggacgtccttcctgaaggccaagttggtgtgctcc
atgcctgagctcaactttgtcttcaacgtggttcatgatgtgttcatcctaaagacccca
gactggagggaaacggtcatctatggagttttcacttctcaatgggggaatgttggcttg
tcagccgtgtgtgcctacaacatgtcatctgtggaggaggtgttctcaaaggggaaatat
atgcagaaagccactgtggaacagtcccacacaaagtgggttcgatacaacggcatcacc
cccagtcctcgtcctggagcgtgcatcaacaaccacaaccgtctgcagaacatcagcaac
tcgctgcatctcccagataaaacgctccagttcgtgaaggaccacccactgctggaggac
ccagtgctgcctattggcaacggccccaggctcatcaccaaagacgtcaactacacgcag
atcgcagtggagagggtcactgcccttgacaacaatgtgtatgacgtcatcttcactggg
acagataaaggagtcttgcacaaatctgtggtttacgagggagaagtccacacggtggag
gaaattcagctcctcaaaaatgctgaagccattaagacgttgcttctgtcaacacaaggg
gccaggtttttgtatgctggttcggactctggtgtggtgcagtcgcccactgccttctgt
gagaagtaccccacctgtggggactgcaccctggcccgggacccctactgtgcctgggac
ccccagacctccgcgtgtgtcaacatattccacaaccaggatgtcacagatctcagtcgt
ttgatccagagcatgactggtgacgctgacagatgtcccccagccaggagatctgcaccc
gaagagtaccaggtcatggtagtgaagccagggagttcagcggagctgccctgccccctg
ctgtccaacaaggcagtggcactgtggagagttaatggtagcgtcctgaccgacgaggcc
tccaagttccacttgctgtccgacacggggctgctgatctacagcgtgggccctgaggag
cagggcgtctacgagtgctggtctgtggaacgggcggccggcaaggacttcagcagcctg
gtggcaggatacagacttcgtttgcccgtgaagccgcgctcacctggccacctcccccgc
tcgtcgtcctcctccgcaagcacttctgccacagtctcctccggcgctaagctggccaac
gtgcccactgcacctgctgaaggtaacggtatcacctccggcccccctccactaacatct
gccctgcccagctccacccagcaaaccccctcattaaccccagcgctcagctcaagcatc
agccacaccgctagtgccctgcagcccatgcccccctccagtaacgcgccgagcaccaag
acgctggacccctcggccgagtatctgcagcacgacaacagcaacgccctcctcttcctc
ttcctgcttttcttcctgctcttcctggctgcgctggcatacaactgttacatgcggtac
ctgccagcgccatgcctacggctacgtgccgccctgctgggcacgcagaagaaggcgcag
cccgagtacgtggcctgcgaggcgggactcatggagacgacggccgaaaagccggagctg
actgagcagctgttccagaacggagctcagttgcgtgccctccgtgacaccggctatgaa
acggaacctgaatgtgggaactgccaaattccctcgcagggttatggtgatgagagcccc
ccgaaagagaggccctttgatgtggactgcgtgtcgcagcctattgagtatgcagatgca
gactag
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