KEGG   Clupea harengus (Atlantic herring): 105911509
Entry
105911509         CDS       T09045                                 
Symbol
sema4d
Name
(RefSeq) semaphorin-4D isoform X4
  KO
K06521  semaphorin 4
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:char04090]
    105911509 (sema4d)
CD molecules [BR:char04090]
 Proteins
  105911509 (sema4d)
SSDB
Motif
Pfam: Sema PSI Ig_2 I-set Ig_3 ig
Other DBs
NCBI-GeneID: 105911509
NCBI-ProteinID: XP_012695775
Ensembl: ENSCHAG00000023640
UniProt: A0A6P8GGC7
LinkDB
Position
12:2336556..2376514
AA seq 881 aa
MAFSVLGVFLGLLLEVSTHGPSSGPRTSWKHEDVNLVEFSEPGVFNYSTLLLSEERHVLY
VGAREAIFELSMKDVSVRKNKVIWKVPETHMEKCIAKGKSKETECLNYIRVLQVLNKDSL
YVCGTHAFQPQCDHLTLKDFKLQEKQEDGRGKCSFDPAQSFTTVMVDGDLYSGTAYNFLG
SEPIISRYSLSQSLLRTEYSTSWLNEPSFVFADVIREGKNSADDEDDKIYYFFTEVSVEY
EFYGKLLIPRIARVCKGDLGGQRTLQKKWTSFLKAKLVCSMPELNFVFNVVHDVFILKTP
DWRETVIYGVFTSQWGNVGLSAVCAYNMSSVEEVFSKGKYMQKATVEQSHTKWVRYNGIT
PSPRPGACINNHNRLQNISNSLHLPDKTLQFVKDHPLLEDPVLPIGNGPRLITKDVNYTQ
IAVERVTALDNNVYDVIFTGTDKGVLHKSVVYEGEVHTVEEIQLLKNAEAIKTLLLSTQG
ARFLYAGSDSGVVQSPTAFCEKYPTCGDCTLARDPYCAWDPQTSACVNIFHNQDVTDLSR
LIQSMTGDADRCPPARRSAPEEYQVMVVKPGSSAELPCPLLSNKAVALWRVNGSVLTDEA
SKFHLLSDTGLLIYSVGPEEQGVYECWSVERAAGKDFSSLVAGYRLRLPVKPRSPGHLPR
SSSSSASTSATVSSGAKLANVPTAPAEGNGITSGPPPLTSALPSSTQQTPSLTPALSSSI
SHTASALQPMPPSSNAPSTKTLDPSAEYLQHDNSNALLFLFLLFFLLFLAALAYNCYMRY
LPAPCLRLRAALLGTQKKAQPEYVACEAGLMETTAEKPELTEQLFQNGAQLRALRDTGYE
TEPECGNCQIPSQGYGDESPPKERPFDVDCVSQPIEYADAD
NT seq 2646 nt   +upstreamnt  +downstreamnt
atggccttcagtgttctgggagtgtttcttggactgctcctcgaggtctccacacacggc
ccttccagtggtcccaggacatcttggaaacatgaagatgtgaatttggtggagttctct
gagcccggcgtctttaactactcaacgctgctcctgagtgaggagaggcatgtgctgtat
gtgggtgcgagggaggccatcttcgagctcagcatgaaggatgtgtctgtgaggaaaaac
aaggtcatctggaaagttccagaaacacacatggaaaaatgcattgcaaaaggaaagtca
aaagagacagaatgtctgaactacattcgggttttacaagtcctcaacaaagacagtctg
tacgtctgtgggacgcatgccttccagccccagtgtgaccacctgactttaaaagatttc
aagcttcaggagaagcaggaggatgggagggggaagtgctccttcgatcctgcacagagt
tttaccaccgtcatggttgatggagacctgtactcaggaacggcctataacttcctgggg
agcgaacccatcatttccagatactccctgtcccagagtctgttacgcacagagtactcc
acatcttggcttaatgagcccagctttgtgtttgctgatgtcatcagagagggcaaaaac
agtgctgatgatgaagacgataagatctactacttcttcacagaggtgtctgtggaatat
gagttctatggcaagctgctgatccccaggatcgcacgcgtctgcaagggtgacttaggt
ggccagaggacgctgcagaagaagtggacgtccttcctgaaggccaagttggtgtgctcc
atgcctgagctcaactttgtcttcaacgtggttcatgatgtgttcatcctaaagacccca
gactggagggaaacggtcatctatggagttttcacttctcaatgggggaatgttggcttg
tcagccgtgtgtgcctacaacatgtcatctgtggaggaggtgttctcaaaggggaaatat
atgcagaaagccactgtggaacagtcccacacaaagtgggttcgatacaacggcatcacc
cccagtcctcgtcctggagcgtgcatcaacaaccacaaccgtctgcagaacatcagcaac
tcgctgcatctcccagataaaacgctccagttcgtgaaggaccacccactgctggaggac
ccagtgctgcctattggcaacggccccaggctcatcaccaaagacgtcaactacacgcag
atcgcagtggagagggtcactgcccttgacaacaatgtgtatgacgtcatcttcactggg
acagataaaggagtcttgcacaaatctgtggtttacgagggagaagtccacacggtggag
gaaattcagctcctcaaaaatgctgaagccattaagacgttgcttctgtcaacacaaggg
gccaggtttttgtatgctggttcggactctggtgtggtgcagtcgcccactgccttctgt
gagaagtaccccacctgtggggactgcaccctggcccgggacccctactgtgcctgggac
ccccagacctccgcgtgtgtcaacatattccacaaccaggatgtcacagatctcagtcgt
ttgatccagagcatgactggtgacgctgacagatgtcccccagccaggagatctgcaccc
gaagagtaccaggtcatggtagtgaagccagggagttcagcggagctgccctgccccctg
ctgtccaacaaggcagtggcactgtggagagttaatggtagcgtcctgaccgacgaggcc
tccaagttccacttgctgtccgacacggggctgctgatctacagcgtgggccctgaggag
cagggcgtctacgagtgctggtctgtggaacgggcggccggcaaggacttcagcagcctg
gtggcaggatacagacttcgtttgcccgtgaagccgcgctcacctggccacctcccccgc
tcgtcgtcctcctccgcaagcacttctgccacagtctcctccggcgctaagctggccaac
gtgcccactgcacctgctgaaggtaacggtatcacctccggcccccctccactaacatct
gccctgcccagctccacccagcaaaccccctcattaaccccagcgctcagctcaagcatc
agccacaccgctagtgccctgcagcccatgcccccctccagtaacgcgccgagcaccaag
acgctggacccctcggccgagtatctgcagcacgacaacagcaacgccctcctcttcctc
ttcctgcttttcttcctgctcttcctggctgcgctggcatacaactgttacatgcggtac
ctgccagcgccatgcctacggctacgtgccgccctgctgggcacgcagaagaaggcgcag
cccgagtacgtggcctgcgaggcgggactcatggagacgacggccgaaaagccggagctg
actgagcagctgttccagaacggagctcagttgcgtgccctccgtgacaccggctatgaa
acggaacctgaatgtgggaactgccaaattccctcgcagggttatggtgatgagagcccc
ccgaaagagaggccctttgatgtggactgcgtgtcgcagcctattgagtatgcagatgca
gactag

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