Caldicellulosiruptor hydrothermalis: Calhy_1147
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Entry
Calhy_1147 CDS
T01346
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chd
Caldicellulosiruptor hydrothermalis
Pathway
chd03420
Nucleotide excision repair
chd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Calhy_1147
03430 Mismatch repair
Calhy_1147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chd03400
]
Calhy_1147
Enzymes [BR:
chd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Calhy_1147
DNA repair and recombination proteins [BR:
chd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Calhy_1147
MMR (mismatch excision repair)
Other MMR factors
Calhy_1147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADQ06868
UniProt:
E4Q8U9
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All DBs
Position
1164249..1166174
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AA seq
641 aa
AA seq
DB search
MLIPKEQWKPADGIELEKNAEIVVKSNCNYLVIAGPGSGKTELLAQRACFLLQTGICYSP
KRILAISYKKEAAKNLAERVQKRCGQKLANRFVSLTFDAFAKSLLDRFLYGLPEVYRPDV
NYDINPSVLREGKRSILLRFEGKEPKHLLTGDYVDGIHSLSIENIINKKMTDKKLPFNNE
PNNLEEWMINELWKLFLKGDKDFKPALTFPMISRLAEYILRENPFVLKALRATYSHVFLD
EFQDITGVQYDLLKTCFLGSNAVITAVGDNKQRIMEWAGALRNSFELFEKDFNAQRINLL
MNHRSAPRLVELQKVFIKEAFGEKIDLSDLKIENSKKWSKDDGICEVWIFNDYIKEAQIL
SENIKKWLNSEDLSHRDICVLVKQRPSKYTNMLIKTLAENSMNARDEGEVSDLLNEEIIQ
FIINLFSLALNINGNNSYTFVYDFIKILNGYDDDTPERFLIKLESEITELLRFANEKLLK
IDNQKQIVELYKIIIRYLKMDRLISYFPQYRNTAWFNDLMNKSIKLLWNEFEITNNWSKA
ITNFIGINSIPIMTIHKSKGLEYDTVVFIGLEDSAFWSIKNQPEQDTCAFFVALSRAKRR
VIITFSKYRDVGANPCQTAENVKKFYELLAKSGIVEYRDFM
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctgataccaaaggaacaatggaaacctgctgatggaattgaacttgaaaaaaatgca
gagatagtagttaaaagtaattgcaactatttagtaatagctggacctggctcaggtaaa
acagagttgcttgctcaaagggcttgttttttacttcaaacgggtatttgctattcacca
aaaaggatacttgcaatcagctataaaaaagaagctgccaaaaatttagcagaaagggtt
caaaaaagatgtggtcagaaattggcgaatagatttgtatcactaacttttgatgctttt
gctaagagccttttggatagatttctgtatggacttcctgaagtatacagacctgatgtt
aattatgatattaatccttctgtattaagagaggggaagcgaagcattttgttaagattt
gagggaaaagaaccgaaacatttacttacaggtgattatgttgatggaattcatagtctt
tcaatagagaatattattaataaaaaaatgacagataaaaagcttccctttaataatgaa
cctaacaatttagaagaatggatgattaacgaattatggaaattatttttgaaaggagat
aaagattttaaacctgctctgacttttccaatgatttcaagacttgctgaatatatcttg
agggaaaatccttttgttcttaaagcattgcgagcgacatattcacatgtatttttagat
gaatttcaggatataacaggagtacaatatgatttattgaaaacttgttttctcgggtct
aatgccgtaataactgcagtaggagataataaacagcgaattatggaatgggcaggagca
ctaagaaattcatttgaattgtttgaaaaagatttcaatgcccaaagaataaatttactg
atgaatcataggtctgcgccgcgtttagttgaattgcaaaaagtttttataaaagaagca
tttggtgaaaaaatagatttgtccgatttaaaaatagagaatagcaaaaaatggagtaaa
gatgatggaatatgtgaagtttggatttttaatgattatattaaagaagctcaaatttta
tctgaaaacataaagaagtggctaaattcagaagatttaagtcatagagatatttgtgtt
ttggtaaaacaacgtccttctaaatacacaaatatgctgattaaaacattagctgaaaat
agcatgaatgcaagagatgaaggcgaagtttcagatttattaaatgaggaaataattcag
tttataattaatttattttcattagcattaaatattaatggaaataattcatacacattt
gtatacgattttataaaaatattaaatggatatgatgatgacactccagagaggttttta
attaaacttgaatctgaaataacagagttattgaggtttgcaaacgaaaaactacttaag
attgataatcagaaacaaattgtagaattatataaaattataattagatatttaaaaatg
gatagattaatatcctattttccgcagtatagaaatacagcatggtttaatgatttaatg
aataagtctattaaattattgtggaatgaatttgaaataacaaataattggtcaaaagca
ataactaactttataggaataaacagtattcctattatgactattcataaaagtaaaggg
ctcgaatatgatactgttgtattcattggtttagaagattcagcattttggagtattaaa
aatcaacctgaacaagatacttgcgccttttttgtagctttatcgagagcgaaaagacgt
gtaataataacttttagtaaatatagagatgtcggagcaaatccttgccaaactgcagaa
aatgttaaaaaattttatgaattacttgccaaatcgggtattgtagaatatagagatttt
atgtaa
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