Colletotrichum higginsianum: CH63R_06378
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Entry
CH63R_06378 CDS
T08176
Name
(RefSeq) Rad4 transglutaminase-like domain-containing protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
chig
Colletotrichum higginsianum
Pathway
chig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CH63R_06378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chig03400
]
CH63R_06378
DNA repair and recombination proteins [BR:
chig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CH63R_06378
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Ortholog
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GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
28865460
NCBI-ProteinID:
XP_018159203
UniProt:
A0A1B7YF88
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Position
4:3570116..3572839
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AA seq
888 aa
AA seq
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MAGRKRTRVSRSRAAKSDVLDVYQEMLAEATTDTGLSTSVEPPAKRLKRPGERKMEAGIA
TTSMEAGGVDEDEAQGIEFEDVTLPQATIQTMYRDSEDDDDEEEEDDDDDEELKFENIDF
ATMQPESDAREEPQTLTLNLSEHGGTKAGIQKRTMKRKPITKEEKERRIFTHRTHLLCLI
LHCALRNRWCNDEQAQRSLRPLLSKKTINYLTPGPSLPQFGQTESLKNGLQQAGSMFKSK
FQITERGLRRPLWAEDPKHLDNYELPANMDSCLNRSDFRDAARKLCGSRDVGAQLYCALL
RSVGVRARLVCSLQPLSFVHGGPNLPKPRSIETPIKPTREDKIRTQLSRYRAVADESPSS
ASGLTSPLRRLGHPNAAAYQLPLLSTPPPAAQKSKETPKRIHESPFPVYWVEVLDVGHQK
WQPVDPLVTNSIWKPKALEPPATDKENSLTYVIAFDNDGTVRDVTRRYAKAYTAKTRRLR
IETAVDRGDRWWRKALEPFALPWPTDLDQIEDNELNATEGREPMPRNVADFKDHPVFALE
RHLRRNEVLIPGSQPAGTVAAGSRAPLEKVYRRKDVRIARSRDKWYRMGREVKPMEVPVK
FLPRRSNTKPGDYVDDGYGGDERNAAGTPVFTQEQTEVYHAPPVVNGRVPKNKFGNIDVY
VASMVPEGGVHIHDEFDTAVRAACMLGIDYAPALSGFQFKGKQGTAVFNGVVVAQEYELA
VRAVMGGFEDMDAQAELNKRSLAALHTWRRFLVALRIRERVWAGADAEERAEEERRLVGS
VEVDTTGGGLGKYSAEKSGGFFTEESVAGDDARTMTGSIIHGEVGSILDGDSETSHGGRC
GDEDGDGTEDGAGFELEPHDNMLEDAPSDVTEEYDMVDDEGGGGFLVD
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcggaaacgaaccagggtcagccggtccagggccgcaaagtccgatgtactg
gatgtctatcaagaaatgctggccgaggccaccacagacacaggcctgtccacgtcggta
gagccaccagcaaaaagactcaagagacccggagaaaggaagatggaggccggcatcgcg
accacgagtatggaagctggaggagttgatgaagatgaagctcaaggcatcgagttcgaa
gacgtaactcttcctcaagcgacgatccagactatgtacagagattcagaggacgacgac
gatgaagaagaagaagacgatgatgacgatgaagagcttaagtttgagaatatcgacttc
gcaactatgcagcctgagtcagacgcccgcgaagaacctcaaacactcacactgaatcta
tcagaacatggcggcaccaaggccggtatccaaaagagaaccatgaaacgaaagcccatc
acgaaagaggagaaggagcgccgcatatttactcacaggacgcatcttttgtgtctcata
ctgcactgcgccctgaggaatcgttggtgtaatgatgagcaagctcagaggagccttcgt
cctcttctaagcaagaagacaatcaattatctgacaccaggtcctagtcttccccaattt
gggcaaacggagtcactgaaaaatggactgcagcaagcggggagtatgttcaagtctaag
ttccagattactgaaagagggctgcgccggcccctatgggccgaggatcccaaacatctc
gacaattatgaactcccggccaacatggattcatgcctgaatcgttcggatttcagagat
gcagcgaggaagctgtgcgggtctcgggacgtgggtgctcagctgtactgcgctctattg
cggtccgtcggagttcgtgctcgtctggtttgttcattacagccattgtcgtttgttcat
ggcggcccgaacctaccgaaaccccggtcaatcgagacaccaataaagccgaccagggag
gacaagataaggactcagctatcacgttacagagccgttgcagacgagtcgccgtcttcc
gcctcgggcctaacctcaccacttcggcggctaggtcatcctaatgccgcagcctaccag
ttgccactgctatctactccgccgccagcagcacaaaagtcgaaagagacgcccaagagg
attcatgagtcgcctttcccagtctactgggtcgaggtgcttgacgttggtcatcaaaaa
tggcagcccgtagacccgctggtcacgaattccatctggaaacctaaagcattagaacca
ccagctaccgacaaggagaactcactgacttacgtcatcgcgttcgataacgacggcacg
gtacgagatgtcaccagacggtatgccaaggcttacacagccaaaacgcggcgacttcgc
attgagacagccgtcgacagaggtgatcggtggtggcgaaaagcgctggagccgtttgct
ctgccttggccgacagaccttgatcagatcgaagataacgagctgaatgcgactgaagga
cgcgagccaatgcctcgcaacgttgcagacttcaaagaccacccggtgtttgcactggaa
aggcacttgaggcgtaacgaggtcctcatcccaggatcacagcctgcaggaacggttgca
gccggaagtagggctccccttgagaaagtgtatcgacgtaaggacgtgcgcattgcccga
agcagggacaagtggtatcgtatgggacgtgaagtgaagccgatggaggtgcccgtcaag
ttcctgccacgacggtcgaatacaaagccaggagactacgtcgatgacggctatggaggg
gacgaacgcaacgcggctggtacgcctgtcttcactcaggaacagacagaagtgtaccac
gcgccaccagtcgttaacggacgagtgccgaagaacaagtttggcaatatcgatgtttac
gtcgcaagcatggtgcctgagggcggtgttcatatccatgacgagttcgacactgctgtg
agggccgcctgcatgttaggcatcgattacgcgcctgctctgtcaggattccagttcaaa
ggcaagcaaggcacggcggttttcaacggcgtagtggtggctcaagagtatgaattggcc
gtacgtgcggtcatgggcggcttcgaagatatggatgcgcaagcagagctcaacaagcga
tcattggcggctttgcacacgtggaggcggttccttgtggctctccgtatccgggagcga
gtatgggcaggggcggatgccgaggagcgtgccgaagaagagagaagattggttggatcg
gttgaggttgatacaacaggtggtggcctgggaaaatatagcgcggagaagagtggcgga
ttctttacagaggagtcggtggcgggtgacgatgccagaaccatgactggaagcatcatc
catggcgaagtcggatccatccttgacggtgatagcgagactagccatggaggtcgatgc
ggggacgaggacggagacgggactgaagatggagccggtttcgaactggagccgcacgat
aatatgctcgaggacgcgcctagcgatgttaccgaggagtacgatatggtggacgatgag
ggcggcggagggtttttggtggactag
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