Colletotrichum higginsianum: CH63R_06710
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Entry
CH63R_06710 CDS
T08176
Name
(RefSeq) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
chig
Colletotrichum higginsianum
Pathway
chig00040
Pentose and glucuronate interconversions
chig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CH63R_06710
Enzymes [BR:
chig01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CH63R_06710
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
28865792
NCBI-ProteinID:
XP_018159535
UniProt:
H1VJV6
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Position
4:complement(4619833..4620938)
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AA seq
325 aa
AA seq
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MRLLVVAFLVTLTVASPVNIISARNQLALRQASEPCTIGYCTQNGGTTGGAGGASVTVST
VDQLVAAAQKEGPLTIFVSGALSGNVKVRVSSHKTIIGEKGSSLTNIGLFVREAKNVILR
NLKISGVKAANGDAIGIDRSTNVWVDHCDLSGDLSGGKDDLDGLLDFSHASDWVTVSNVY
LHDHWKGSLAGSADTNTEDKGKLHITYANNYWYNINSRTPFVRFGTVHIINSYYDKLLLS
GVNPRMGAQALVQSTAFANSPARAIFSEGSTEPGFAVVEDVDLGGSQNTALKGNLTSDSL
PYKIAPIGSSKVASTIPFTAGQKLY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcctggtggtcgcattcttagttaccctcacggtggcgtcacccgtcaatatc
atcagtgctcgtaaccagcttgctctccggcaagcctccgagccctgtacaatcggctac
tgtacccaaaacggtggcaccaccggaggtgctggcggcgcaagtgtcaccgtcagtact
gtcgaccaacttgttgctgccgctcagaaagagggccctcttaccattttcgtatccggc
gccctctccggaaacgtcaaggtccgcgtttcttcccataagacgatcattggggagaag
ggtagctctctcaccaacattggcctctttgtccgcgaggctaagaatgttattctacgc
aacctgaaaatcagcggcgtcaaggctgccaacggggacgcaatcggtatagaccggtct
accaacgtctgggtcgaccactgcgatctttcgggcgacctgagtggaggcaaggatgac
cttgacggtctcctcgacttctcgcacgcctctgactgggtaacggtttccaacgtttac
ctacatgaccactggaaagggtctcttgccggctcagccgacaccaacaccgaggataag
ggcaagctgcacatcacctacgccaacaactactggtacaacatcaactcccgtacccct
tttgtccgctttggcaccgtccacatcatcaactcgtactacgacaagcttctcttaagc
ggcgtgaacccccgaatgggtgcccaggctctcgtacagagtactgccttcgccaacagc
cctgcccgggccatcttttccgaaggctcaacggagccaggttttgccgtggtcgaggat
gttgatctcggcggctcgcagaacactgctctcaagggaaacctcacgtctgactcccta
ccttacaagatcgctcccatcggctcgagcaaggtcgccagcacgattccttttactgct
ggtcaaaagttgtattaa
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