Chitinophaga sp. XS-30: FW415_00965
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Entry
FW415_00965 CDS
T06207
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
chit
Chitinophaga sp. XS-30
Pathway
chit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FW415_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chit03400
]
FW415_00965
DNA repair and recombination proteins [BR:
chit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FW415_00965
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GFIT
Motif
Pfam:
MutS_V
MutS_III
AAA_23
AAA_14
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QEH39517
UniProt:
A0A5B9WG41
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Position
228269..229597
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AA seq
442 aa
AA seq
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MELDKTTYLDLSIFNRDDEYSLFHKLDFTTTSGGREYLRKLFSTPLQDIQAIHNRQQMLR
YLLEKETQWPPMISNGSIVVVENYLNAEIEPISSSGGISLYLNAVVTKTIYAPDYGFIKF
SFDQLLNLIKGFKYLETHFNSDDAPVTLKLLLDRARVLLAQKEFDDIVELQENGRFSFVE
ILRYDRLIRRKHRKVLWELTELYTRLDAYHSMAMAIRHFSLQFPAFTDDNKPHIAIQQLY
HMILPQPVAYDIAMDPHKHFLFLTGANMAGKTTFIKAVGIAVFLAHLGMGVPAKSMQLTF
FHGILSNIDVKDNIFKGESYFYSEVQRIKNTIIKISDGKNWLILIDEMFKGTNVEDAKNC
SLAVINGLLHNHNCLYILSTHLYEIADELQGEDQIIFKYFQSEVIDDNLQFTYELKDGIA
KEKIGFLILKKEKVIELLEKMK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggagctggataaaacaacctacctggatctctctatttttaaccgggatgacgaatat
tccctgtttcataaactggatttcaccaccacctccggcggccgggagtacctgcgcaaa
ttgttcagcacaccgcttcaggatattcaggcgatccacaaccgccagcaaatgctccgc
tacctgctggaaaaagaaacgcaatggccgcccatgatctccaacggctccattgtggta
gtggagaattacctgaatgcggaaatagagccgatatccagctccgggggcatttcactg
tacctgaacgctgttgtcaccaaaaccatctacgcgccggactacggttttatcaaattc
tccttcgatcagctgctcaaccttatcaaaggtttcaaatacctggaaacacatttcaat
tccgatgacgctcccgttacccttaagctgctgctggacagggcacgggtactgctggcg
cagaaagagttcgacgacatcgtggaactgcaggaaaacggccgcttcagtttcgtggag
atactgcggtacgaccggctcatccgccggaagcaccggaaagtattatgggaactgacg
gaactgtacacccggctggacgcctatcacagcatggctatggccatacgccacttttcc
ctgcaattcccggcgttcacagacgataacaaaccgcacattgccatccagcaactgtat
cacatgatcctgccgcaaccggtagcctatgatattgcgatggacccgcataaacatttc
ctcttccttaccggcgccaatatggccggcaagaccaccttcatcaaagccgtgggcatc
gccgtattccttgcgcacctggggatgggcgtaccggcgaaaagcatgcaactgactttt
ttccatggcattctcagcaacatcgatgtaaaggataatatcttcaaaggcgaaagttat
ttctacagtgaagtgcaacgcatcaagaataccatcatcaagatcagtgacggaaaaaac
tggctgatcctcatcgatgaaatgttcaaaggtaccaatgtggaagatgccaagaactgt
tccctggcggtgatcaacggcctgctgcataaccacaactgcctctacatcctgtccacg
cacctttatgagatcgccgatgaattgcagggagaagaccagatcattttcaaatatttc
cagtctgaagtgatcgatgacaatctgcagttcacctatgaactgaaggacggaatcgct
aaagaaaagatcggctttctcatcctgaaaaaagaaaaagtaattgagttgctggagaag
atgaaatga
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