Cardiobacterium hominis: NCTC10426_02165
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Entry
NCTC10426_02165 CDS
T05791
Symbol
gyrB_2
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
chj
Cardiobacterium hominis
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chj03032
]
NCTC10426_02165 (gyrB_2)
03400 DNA repair and recombination proteins [BR:
chj03400
]
NCTC10426_02165 (gyrB_2)
Enzymes [BR:
chj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC10426_02165 (gyrB_2)
DNA replication proteins [BR:
chj03032
]
Prokaryotic type
DNA Topoisomerases
NCTC10426_02165 (gyrB_2)
DNA repair and recombination proteins [BR:
chj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC10426_02165 (gyrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
VEG78104
LinkDB
All DBs
Position
1:complement(2314033..2316435)
Genome browser
AA seq
800 aa
AA seq
DB search
MSDNNSYDSSRIRVLKGLEAVRIRPGMYIGNTDDGSGLHHMVFEVVDNAIDEALAGYCTE
INVIIHQDESITVRDNGRGIPVDIHPEEGRSAAEVIMTVLHAGGKFDDNAYKVSGGLHGV
GVSVVNALSERLTMTIKRDGHIHQQTYRHGEPQAPLAIIGDSDSTGTEINFLASSDTFGT
VIYDYDTLAQRLRELSFLNAGVRIELRDERSDKNQIFQYEGGVKAFVEYQNRNKTPIHPS
IFYCAADKDGVAVEIALQWNDSYAENVYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMEE
EGLLKKAKIATSGDDSREGLTAIVSVKVHDPKFSSQTKDKLVSSEVKSAVENVLADKLKE
YLLEHPGEAKTIAGKIVDAARAREAARKAREMTRRKDALDIAGLPGKLADCQEKDPAHSE
IFIVEGDSAGGSAKQGRNRKFQAILPLKGKILNVEKARFDKMLGSAEIGTLITALGTGIG
KDDFDAEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKVTK
GRNKQYLKDDHELNELLLTQALDDANLHLAADAPAITKEAFEALAREHGQIENLIKRLHR
YDSRVLHALIEAPELTHATFADAHALQEWLAAYQRQLDRFAEAGIALRAEILPGEVARIN
VRIEQHANLSQNTFDPNFADSNEYRHINTFGKKVRGLLGDGAYFQNSKERLEVEHFHQVI
NALLAEGKKAYDIQRYKGLGEMNPEQLWETTLDPAVRRMLQVQLKDARLADEIFTTLMGE
EVEPRRAFIEDNANSANIDI
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaataactcctacgactcctcccgcattcgcgtactcaaaggactggaagcg
gtacgcatccgccccggcatgtacatcggcaacaccgacgacggcagcggcctgcatcac
atggtctttgaagtcgtcgataacgccatcgacgaagccctcgctggatactgcaccgaa
atcaacgtcatcatccaccaagacgaatccatcaccgtgcgcgacaacggccgcggcatc
ccggtcgatatccaccccgaagaagggcgcagcgctgccgaagtcatcatgactgtcctg
cacgcaggcggcaaattcgatgacaacgcctacaaagtctccggcggcctgcacggcgtc
ggcgtctccgtggtgaacgccctctccgagcgcctgaccatgaccatcaagcgcgacggc
cacatccaccaacaaacctaccgccacggcgaaccgcaagcgccgcttgccatcatcggc
gacagcgatagcactggcaccgaaatcaacttcctcgccagcagcgacaccttcggcacc
gtcatctacgactacgacaccctcgcccagcgcctgcgcgaactctccttcctcaacgcg
ggcgtgcgcatcgaactgcgcgacgaacgcagcgacaaaaaccaaatcttccaatacgaa
ggcggcgtcaaagccttcgtcgaataccagaaccgcaacaaaaccccgattcaccccagc
atcttctactgcgccgctgacaaagacggcgttgccgtcgaaatcgccctgcaatggaac
gacagctacgccgaaaacgtctactgctttaccaacaacatcccgcagcgcgacggcggc
acccacctcgcgggcttccgcgcggcgatgacccgcaccctgaacgcctacatggaagaa
gaaggcctgctgaaaaaagccaaaatcgccaccagcggcgacgactcgcgcgaaggactc
accgccatcgtctccgtcaaagtgcacgaccccaaattcagctcgcagaccaaagacaaa
ctcgtctccagcgaagtcaaaagcgcggtagaaaacgtccttgccgacaaactcaaagaa
tacctgctcgaacaccccggtgaagccaaaaccatcgccggcaaaatcgtcgatgccgcg
cgcgccagagaggccgcgcgcaaagcccgcgaaatgacgcggcgcaaagacgcgctcgac
atcgcaggcttgcccggcaaactcgccgactgccaggaaaaagacccggcgcactccgaa
atcttcatcgtggaaggcgactcagcgggcggctctgccaaacagggacgcaaccgcaaa
ttccaggccatcctgccgctcaaaggcaaaatcctgaacgtcgaaaaagcgcgctttgac
aaaatgctcggctccgccgaaatcggcaccctcatcaccgcactcggcaccggcatcggc
aaggacgactttgacgccgaaaaactacgctaccaccgcatcatcatcatgaccgatgcc
gacgtggacggcgcgcacatccgcacactgctgctcaccttcttctaccggcaaatgccc
gaactcgtcgaacgcggccatatctacatcgcccagccgccgctgtacaaagtcaccaaa
ggccgcaacaaacaatacctgaaagacgaccacgaactaaacgaactgctgctgacccag
gcgctggacgacgccaacctgcatctcgccgccgacgcgcccgccatcaccaaagaagcc
tttgaagcgctggcgcgcgaacacggacaaatcgaaaacctcatcaaacgcctgcaccgc
tacgacagccgcgtcctgcacgccctcatcgaagcgccggaactcacccacgccaccttc
gccgacgcgcacgcgctacaagaatggctcgccgcctaccagcgccaactggaccgcttt
gcagaagcgggcatagccctgcgcgccgaaatcctgccgggagaagtcgcacgcatcaat
gtgcgcatcgaacaacacgccaacctcagccaaaacaccttcgaccccaactttgccgac
agcaacgaataccgccacatcaacaccttcggcaaaaaagtgcgcggcctcctgggcgac
ggcgcctacttccagaacagcaaagagcgcctcgaagtcgaacacttccaccaagtcatc
aacgccctgctcgccgaaggcaaaaaagcctacgacatccagcgctacaaaggcctcggc
gaaatgaaccccgaacaactgtgggaaaccacgctcgacccggcggtgcgccgcatgctg
caagtacaactcaaagacgcgcggctggcggacgaaatcttcaccacgctgatgggagag
gaagtcgaaccgcgccgcgccttcatcgaagacaacgccaacagcgccaacatcgacatc
tga
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integrated database retrieval system
