Chondrocystis sp. NIES-4102: NIES4102_14040
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Entry
NIES4102_14040 CDS
T05085
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon00300
Lysine biosynthesis
chon00470
D-Amino acid metabolism
chon01100
Metabolic pathways
chon01110
Biosynthesis of secondary metabolites
chon01120
Microbial metabolism in diverse environments
chon01230
Biosynthesis of amino acids
Module
chon_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES4102_14040 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES4102_14040 (dapF)
Enzymes [BR:
chon01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NIES4102_14040 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BAZ44395
UniProt:
A0A1Z4RPK5
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Position
complement(1624270..1625112)
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AA seq
280 aa
AA seq
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MVIEFSKYQGLGNDFILIDNRHSAEPIITSEQAVKMCDRHFGIGANGVIFALPGQEGTDY
TMRIYNSDGSEPEMCGNGIRCLAKFIADLEGNTEVNISYRIQTLAGVIIPKLEANGDVTV
NMGKPQLAAAAIPTTLNSDPQKVVAQSLEVGEFSWLVTAVSMGNPHCITFVDDCAAIDLE
KIGPLFEHHPVFPQRTNTEFIEVIKPDYIKMRVWERGAGITLACGTGACASVVAGVLNNQ
CDRNCTVELPGGCLQINWSETDEQVYMTGPAVEVFKGKYL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcgagtttagtaaataccaagggttaggtaatgattttattttgattgataat
cgtcattctgccgaaccaataattacttctgaacaagcagtgaaaatgtgcgatcgccat
tttggcattggtgctaatggtgtcatttttgccctcccaggtcaggaaggtacagactac
accatgagaatttataattccgacggttcagaacccgaaatgtgtggtaacggcatacgc
tgtcttgctaagtttatcgccgatctagaaggaaatacagaagttaatatttcttacaga
attcaaactttggcaggggtgattattcctaaactcgaagctaatggggacgttactgtt
aatatgggcaaacctcagttagcagcagcagcaatacctactactttaaattcagatcct
caaaaggttgtcgcccagtctttagaagttggcgaattctcttggttagtaaccgccgtt
agtatgggtaatcctcactgcattacttttgtagatgattgtgctgctatagatttagaa
aaaatcggcccattatttgaacatcaccctgtttttccgcaacgcactaatactgagttt
atcgaggtaatcaaaccagattatattaagatgcgagtttgggaaagaggcgcaggaatt
accttagcttgtgggacgggggcttgtgcgtcggtggtggctggagtattaaataatcaa
tgcgatcgcaattgtactgtggaattacctgggggctgtttgcaaattaattggtcagaa
actgatgaacaggtttatatgactgggcctgcggtagaagtgtttaagggaaagtattta
tag
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