Chromobacterium phragmitis IIBBL 274-1: DK843_15700
Help
Entry
DK843_15700 CDS
T05744
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DK843_15700 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrb03400
]
DK843_15700 (xth)
Enzymes [BR:
chrb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DK843_15700 (xth)
DNA repair and recombination proteins [BR:
chrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DK843_15700 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AXE35622
UniProt:
A0A344UK24
LinkDB
All DBs
Position
3281909..3282685
Genome browser
AA seq
258 aa
AA seq
DB search
MLRIVSANLNGIRSADKKGFFDWLAGIGADFVCVQELKAQAGDLSERMRNPDGLAGYFHY
AEKKGYSGVGVYTRHQPDAVVEGLGVDWIDAEGRFLQLDFGKLSVISLYLPSGSSSDERQ
QVKFDFLDVFMPHLEKLRADGRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEERAWMT
DLLGRVGWRDAWRTLYPEVPGYTWWSNRGQAYAKDVGWRIDYHIVTPSLMELAESASVYK
EEKFSDHAPLIVDYRRSL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaatcgtttccgccaacctcaacggcatccgctcggcggacaagaagggcttt
ttcgactggctggccggcatcggcgccgacttcgtctgcgtgcaggagctgaaggcgcag
gcgggcgacctgtccgagcggatgcgcaatccggatgggctggccggctatttccactac
gccgagaagaagggctacagcggcgtcggcgtctacacccgccaccagccggacgcggtg
gtggagggcttgggcgtggactggatagacgccgaaggccgcttcctgcaactggatttc
ggcaagttgtcggtgatttcgctgtacctgccgtccggttccagcagcgacgagcgccag
caagtgaagttcgatttcctcgacgtgttcatgccgcacctggaaaagctgcgcgccgac
ggccgcgacatcgtgatctgcggcgactggaacatcgcccacaacgagatcgacctgaaa
aactggaagggcaacctgaagaactccggcttcctgccggaggagcgcgcctggatgacc
gacctgttgggccgtgtcggctggcgcgacgcctggcgcacactgtatccggaggttccc
ggctacacctggtggagcaaccgcggccaggcttatgccaaagacgtcggctggcgcatc
gactaccacatcgtcacgccgtcgctgatggaactggccgagtccgccagcgtgtacaaa
gaggaaaaattctccgaccacgcgccgctgatcgtcgactaccggcggagcctgtga
DBGET
integrated database retrieval system