Chryseoglobus sp. 28M-23: IE160_00025
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Entry
IE160_00025 CDS
T06824
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
chre
Chryseoglobus sp. 28M-23
Brite
KEGG Orthology (KO) [BR:
chre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chre03032
]
IE160_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
chre03400
]
IE160_00025 (gyrB)
Enzymes [BR:
chre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IE160_00025 (gyrB)
DNA replication proteins [BR:
chre03032
]
Prokaryotic type
DNA Topoisomerases
IE160_00025 (gyrB)
DNA repair and recombination proteins [BR:
chre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IE160_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QOD93685
UniProt:
A0A7L8D3H3
LinkDB
All DBs
Position
4435..6429
Genome browser
AA seq
664 aa
AA seq
DB search
MTASTSHSDNGYGAGDIQVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAG
HCDTIHITLLENGGVQVIDNGRGIPVDEHPIEKRSTVEVVLTILHAGGKFGGSGYAVSGG
LHGVGSSVVNALSSRLQVEVRRQGSIWRQSYQHGVPDAPLAQGEATTETGTTITFWPNDE
IFETVQFDWDTLRTRFQQMAFLNKGLRITITDERVATEGETIVAKEAGDEPLREEFYYEQ
GLVDYVEFLNSAKKTEVVHPEIISFESEDTERRIALEVAMQWTNGYSESVHTYANTINTH
EGGTHEEGFRAALTTLVNRYAREKGILKEKDENLSGDDVREGLTAVISIKLGEPQFEGQT
KTKLGNTEAKSFVQKVTGEHLSDWFERNPVQGKDVIRKAMQAAAARLAARKAREQTRRKG
LLESGGMPGKLKDCQSKDPSLSEIFIVEGDSAGGSAVQGRNPETQAILPLRGKILNVEKA
RLDRALGNAEVQAMITAFGAGIGEDFDPDKVRYHKIVLMADADVDGQHITTLLLTLLFRY
MRPLIDLGYVYLAQPPLYRLKWTNADHEYVFSDRERDVLMESGLASGKRIPKDNGVQRYK
GLGEMNHQELWDTTMNPVSRTLLQVTLDDAAMADAVFSTLMGEDVESRRTFIQQNAKDVR
FLDI
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgacagcctcgacttcgcactcggacaacggatacggcgccggcgacatccaggtactc
gaggggctcgaggcggtacgcaagcgcccgggcatgtacatcgggtccacgggcccgcgc
ggtctgcaccacctcgtgtacgagatcgtcgacaactccgtcgacgaggccctcgccggc
cactgcgacacgattcacatcacgctgctcgagaacggcggtgtgcaggtcatcgacaac
ggccgcggcatccccgtcgacgagcacccgatcgagaagcggtcgaccgtcgaggtcgtc
ctgacgatcctccacgcgggcggcaagttcggcggcagcggctacgccgtctcgggcggc
ctccacggcgtcggcagctccgtcgtcaacgcgctctcctcgcgtctccaggtcgaagtg
cggcgccagggctcgatctggcggcagagctatcagcacggtgttccggatgccccgctc
gcgcagggcgaggcgacgaccgagaccggcacgaccatcacgttctggccgaacgacgag
atcttcgagaccgtgcagttcgactgggacaccctgcgcacgcgcttccagcagatggcc
ttcctcaacaagggtctccgcatcaccatcaccgacgagcgcgtcgcgaccgagggcgag
acgatcgtcgccaaggaagcgggcgacgagcccctgcgcgaggagttctactacgagcag
ggcctcgtggactacgtcgagttcctcaactcggcgaagaagaccgaggtcgtgcacccc
gagatcatctccttcgagtcggaggacaccgagcgccgcatcgcgctcgaggtcgccatg
cagtggaccaacggctacagcgagtcggtccacacctacgcgaacaccatcaacacgcac
gagggcggcacccacgaagagggcttccgcgctgcactcaccaccctcgtcaaccgctat
gcgcgggagaagggcatcctcaaggagaaggacgagaacctctcaggcgacgatgtgcgc
gaaggcctcaccgccgtcatctcgatcaagctcggcgagccgcagttcgagggccagacg
aagaccaagctcggcaacaccgaggcgaagtcgttcgtgcagaaggtcacgggcgagcac
ctctccgactggttcgagcgcaaccccgtgcagggcaaggacgtcatccgcaaggccatg
caggccgcggccgcgcggctcgcggcgcgcaaggcgcgcgagcagactcgacgcaagggc
ctgctcgagtcgggcggcatgcccggcaagctcaaggactgccagtcgaaagacccctcg
ctcagcgagatcttcatcgtcgagggcgactccgccggcggctcggccgtgcaggggcgc
aaccccgagacgcaggcgatcctgccgctgcgcggcaagatcctcaacgtcgagaaggcg
cgcctcgatcgcgcgctcggcaacgccgaggtgcaggccatgatcaccgccttcggcgcg
ggcatcggcgaagacttcgaccccgacaaggtgcggtaccacaagatcgtgctcatggcc
gatgccgacgtcgacggccagcacatcacgacgctcctcctgacgctgctcttccgctac
atgaggccgctcatcgacctcggctacgtgtacctcgcgcaaccacccctgtaccgcctc
aaatggaccaacgccgatcacgagtacgtgttcagcgaccgtgagcgcgacgttctcatg
gaatcagggctggcgagcggcaagcgcatcccgaaggacaacggggtgcagcgctacaag
ggcctcggcgagatgaaccaccaggagctgtgggacacgacgatgaaccccgtcagccgc
accctcctgcaggtcacgctcgacgacgcggccatggccgacgccgtgttctccaccctc
atgggcgaggacgtcgagtctcgccgcaccttcatccagcagaacgcgaaggacgtgcgg
ttcttggacatctga
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