Chryseoglobus sp. 28M-23: IE160_04330
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Entry
IE160_04330 CDS
T06824
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chre
Chryseoglobus sp. 28M-23
Pathway
chre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IE160_04330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chre03400
]
IE160_04330
Enzymes [BR:
chre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IE160_04330
DNA repair and recombination proteins [BR:
chre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IE160_04330
Prokaryotic type
IE160_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QOD94442
LinkDB
All DBs
Position
877956..878639
Genome browser
AA seq
227 aa
AA seq
DB search
MSTPRPLSDLVAADWVDALAPVAGRIEELGRWLRAEVAAGRPYLPAGPAVLRAFTAPRAE
VRVLIVGQDPYPTPGHPIGLSFAVERSVRPLPRSLANIYRELHDDLGVTPAEHGDLSAWQ
SQGVLLLNRVLTVRAGASGSHRGRGWEEVTEHAVRSLVERGGPLVAVLWGRQAQSLAPAL
DGIPIVATAHPSPLSAHAGFFGSRPFSRVNELLDSQGSPGIDWHLPS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccgcgaccgctgagcgacctcgtggctgcggactgggtggatgctctcgcc
cctgtcgcgggtcgcatcgaggagctcgggcgctggttgcgggccgaggtcgccgcgggt
cgtccgtacctgccggcggggcccgccgtgctgcgggcgttcacggcgccgcgcgccgag
gtgcgcgtgctcatcgtcggccaggacccgtacccgacgcccggccacccgatcggcctg
agcttcgccgtcgagcgctcggtgcggcctctgccgcgcagcctcgcgaacatctaccgc
gagctgcacgacgacctcggggtgacgcccgccgagcatggcgacctctcggcgtggcag
agccagggcgtgctgctgctcaaccgcgtgctcaccgtgcgcgcgggtgcgagcggctcg
catcgcggtcgtgggtgggaggaggtcaccgagcacgcggtgcggtcgctcgtcgagcgc
ggcggccccctcgtcgcggtgctctgggggcggcaggcccagtcgctcgcgccggcgctc
gacggcatcccgatcgtcgcgaccgcgcacccgagccccctctcggcgcacgccgggttc
ttcgggtcgcgccccttcagtcgcgtcaacgagcttctcgactcccagggttccccgggc
atcgactggcacctgccgtcgtag
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