Chromobacterium paludis: FYK34_11650
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Entry
FYK34_11650 CDS
T06224
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chrm
Chromobacterium paludis
Pathway
chrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FYK34_11650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chrm03400
]
FYK34_11650
Enzymes [BR:
chrm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FYK34_11650
DNA repair and recombination proteins [BR:
chrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FYK34_11650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QEL56169
UniProt:
A0A5C1DJM4
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All DBs
Position
2506045..2506899
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AA seq
284 aa
AA seq
DB search
MSRASLLKQEMGLGPAWHPRQGWFEHHPATLQPWQSADTAVADDDAAEDKPEAAASQTAI
APPQPSLAAAPSTADLPPSAIATPASPIPRVETRIELPRQDWPQLEREVSNCQRCRLCET
RTQTVFGRGNPQARWMLIGEAPGENEDKQGLPFVGRAGQLLDNMLAATGLDRDRDVYIAN
VLKCRPPGNRNPAPDEIAACNGYLLQQIRHIQPALIVALGRFAAQTLLETEDAIGRLRGK
VHHYQGVPLVVSYHPAYLLRNQPDKAKAWQDLLLARKVYKQAGR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgccagcctcttgaaacaagaaatgggcctgggccctgcttggcatccgcgg
caaggctggttcgaacaccatcctgccacgctgcagccatggcagagcgcggataccgca
gtcgcagacgatgacgccgcggaagataaaccggaggcggcagccagccaaacggccatc
gccccgccccagccttccctcgcggcggcgccgtcgacggcggatctgcccccctccgcg
atagccacgccggccagccccattccgcgcgtcgagacgcgcatcgaattgccacgacag
gactggcctcaactggagcgggaagtctcaaactgccaacgctgccgcctgtgcgagacg
cgcacccaaaccgtgtttggccgtggcaatccgcaagcgcgctggatgctgattggcgaa
gcgccgggcgaaaacgaggacaagcagggactgcccttcgttggccgcgccggtcagttg
ctggacaatatgctggcggccaccggtctggatcgggatcgggacgtctatatcgccaac
gtgctcaaatgccgcccgcccggcaaccgcaatccggcgccggacgagattgccgcctgc
aacggctatttactgcaacagatccgtcatatccagcctgcgctgatcgtcgcgctaggt
cgcttcgccgcgcaaacgctgttggaaacggaagacgccatcggccgcttgcgcggcaaa
gtacaccactaccagggcgtgccgctggtggtcagctatcacccggcctacctcttgcgc
aaccagccggacaaggccaaggcctggcaggatttgctgctggcgcgcaaggtatacaag
caagccggccgctag
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