Chromobacterium sp. ATCC 53434: CXB49_20170
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Entry
CXB49_20170 CDS
T05234
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
chro
Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:
chro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chro03016
]
CXB49_20170
Enzymes [BR:
chro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CXB49_20170
Transfer RNA biogenesis [BR:
chro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CXB49_20170
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AUH52936
UniProt:
A0A2H5E0W9
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All DBs
Position
4535254..4537128
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AA seq
624 aa
AA seq
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MNVFYEESGSFKVGSIVARSDASLQVDTQHGKRAKLKSANVLLEFSSPLADFLPAVERLS
ADIDLDFLWECCPEDEFAYQELAADYFGHEPSAAEAAALINRLHGAPMYFYKKGKGRYKK
APQEALQAALAGVERKKREQEQIDGWVGELKAGSLPEAIRGQLMPLLWRPDKNTLEYKAF
DQASRELNLPPLRLAAKVGGIPSVPDYLMAGFLMEYFPKGAGFGKYAPPAETPELPVAAA
RAFSIDDANTTEIDDALSVEDLPNGNKRVGIHIAAPTLGVPADSDIEKMVLSRLSTAYFP
GDKITMLPDDVVQAFTLQQGRDCPAFSLYAEVTPAFEPVAFENRIERVHIAANLRHAELE
QVFNEETLANDPGVDYPFKRELVWLWQFAEALEKRRGKHDPSRPVQHDYNIDVVDGVVSI
AIRKRGAPMDKLVSELMILANSEWGRMLAEADIPAMYRAQSMGKVRMTTRPEPHIGLGVA
QYAWSTSPLRRASDFINQRQLEAMIRGEKPPFAQGDAMLFAILRDFDATYGAYLSFQDKM
EHYWCLSYLLQQNITEPTATVIKEDLVRIDGLPLRLRIPGLPELARGDRVQLSVVKVDLL
TQEIELRYTGRLDHVAQEADDGEG
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttttacgaagaaagcggtagtttcaaggtcggcagcatcgtcgcgcgcagc
gacgccagcctgcaggtggacacccagcacggcaagcgcgccaagctcaagagcgccaac
gtccttctggagtttagctctccgctggccgattttctgccggcggtggagcgtctgtcg
gctgacatcgatctcgacttcctgtgggaatgctgcccggaggacgagttcgcctaccag
gagctggccgccgattatttcggccacgagccgtccgccgccgaggccgccgcgctgatc
aaccggctgcacggcgcgccgatgtacttctacaagaagggcaagggccgctacaagaag
gcgccgcaagaggcgctgcaggccgcgctggccggcgtcgagcgcaagaagcgcgagcag
gagcagatagacggctgggtcggcgaactgaaggccggctcgctgccggaagccatccgc
ggccagctgatgcccttgctgtggcgtccggacaagaacacgctggaatacaaggctttc
gaccaggcctcgcgcgaactgaacctaccgccgctgcggctggccgccaaggtcggcggc
atcccgtcggtgccggactacctgatggccggcttcctgatggagtacttccccaagggc
gccggcttcggcaagtacgcgccgccggccgagacgccggagctgccggtggccgcggcg
cgcgccttctccatcgacgacgccaacaccaccgaaatcgacgacgcgctgtcggtcgag
gacctgccgaacggcaacaagcgcgtcggcatccacatcgccgcgccgacgctgggcgtg
ccggccgactccgacatcgagaagatggtgctgtcgcggctgtccaccgcctacttcccc
ggcgacaagatcaccatgctgccggacgacgtggtgcaggcgttcacgctgcagcagggc
cgcgactgcccggcgttctcgctgtacgccgaggtgacgccggcattcgagccggtggcg
ttcgagaaccgcatcgagcgggttcacatcgccgccaacctgcgccacgccgagctggag
caggtgttcaacgaagaaacgctggccaacgatccgggcgtcgactacccgttcaagcgc
gagctggtgtggctgtggcagttcgccgaggcgctggagaagcggcgcggcaagcacgac
ccgagccgtccggtgcagcacgactacaatatcgacgtcgtcgacggcgtggtgtccatc
gccatccgcaagcgcggcgcgccgatggacaagctggtatccgagctgatgatcctggcc
aacagcgagtggggccggatgctggccgaggccgacatcccggcgatgtaccgcgcgcaa
agcatgggcaaggtgcggatgaccacccgtccggagccgcacatcggcctgggcgtcgcc
cagtacgcctggagcacctcgccgctgcgccgcgccagcgacttcatcaaccagcgccag
ctggaggcgatgatacgcggcgagaagccgccgttcgcccagggcgacgcgatgctgttc
gccatcctgcgcgacttcgacgccacctacggcgcctatctgtccttccaggacaagatg
gagcactactggtgcctgagctatctgctgcagcagaacatcaccgagccgaccgccacc
gtgatcaaggaggatctggtgcgcatcgacggcctgccgctgaggctgcgcatccccggc
ctgccggagctggcgcgcggcgaccgcgtgcagctgtcggtggtcaaggtggacctgctg
acgcaggagatcgagctgcgctacaccggccggctcgaccatgtagcacaagaggccgac
gacggcgagggctga
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