KEGG   Chromobacterium sp. ATCC 53434: CXB49_20170
Entry
CXB49_20170       CDS       T05234                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
chro  Chromobacterium sp. ATCC 53434
Brite
KEGG Orthology (KO) [BR:chro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:chro03016]
    CXB49_20170
Enzymes [BR:chro01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CXB49_20170
Transfer RNA biogenesis [BR:chro03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CXB49_20170
SSDB
Motif
Pfam: RNB RNase_II_C_S1
Other DBs
NCBI-ProteinID: AUH52936
UniProt: A0A2H5E0W9
LinkDB
Position
4535254..4537128
AA seq 624 aa
MNVFYEESGSFKVGSIVARSDASLQVDTQHGKRAKLKSANVLLEFSSPLADFLPAVERLS
ADIDLDFLWECCPEDEFAYQELAADYFGHEPSAAEAAALINRLHGAPMYFYKKGKGRYKK
APQEALQAALAGVERKKREQEQIDGWVGELKAGSLPEAIRGQLMPLLWRPDKNTLEYKAF
DQASRELNLPPLRLAAKVGGIPSVPDYLMAGFLMEYFPKGAGFGKYAPPAETPELPVAAA
RAFSIDDANTTEIDDALSVEDLPNGNKRVGIHIAAPTLGVPADSDIEKMVLSRLSTAYFP
GDKITMLPDDVVQAFTLQQGRDCPAFSLYAEVTPAFEPVAFENRIERVHIAANLRHAELE
QVFNEETLANDPGVDYPFKRELVWLWQFAEALEKRRGKHDPSRPVQHDYNIDVVDGVVSI
AIRKRGAPMDKLVSELMILANSEWGRMLAEADIPAMYRAQSMGKVRMTTRPEPHIGLGVA
QYAWSTSPLRRASDFINQRQLEAMIRGEKPPFAQGDAMLFAILRDFDATYGAYLSFQDKM
EHYWCLSYLLQQNITEPTATVIKEDLVRIDGLPLRLRIPGLPELARGDRVQLSVVKVDLL
TQEIELRYTGRLDHVAQEADDGEG
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgaacgttttttacgaagaaagcggtagtttcaaggtcggcagcatcgtcgcgcgcagc
gacgccagcctgcaggtggacacccagcacggcaagcgcgccaagctcaagagcgccaac
gtccttctggagtttagctctccgctggccgattttctgccggcggtggagcgtctgtcg
gctgacatcgatctcgacttcctgtgggaatgctgcccggaggacgagttcgcctaccag
gagctggccgccgattatttcggccacgagccgtccgccgccgaggccgccgcgctgatc
aaccggctgcacggcgcgccgatgtacttctacaagaagggcaagggccgctacaagaag
gcgccgcaagaggcgctgcaggccgcgctggccggcgtcgagcgcaagaagcgcgagcag
gagcagatagacggctgggtcggcgaactgaaggccggctcgctgccggaagccatccgc
ggccagctgatgcccttgctgtggcgtccggacaagaacacgctggaatacaaggctttc
gaccaggcctcgcgcgaactgaacctaccgccgctgcggctggccgccaaggtcggcggc
atcccgtcggtgccggactacctgatggccggcttcctgatggagtacttccccaagggc
gccggcttcggcaagtacgcgccgccggccgagacgccggagctgccggtggccgcggcg
cgcgccttctccatcgacgacgccaacaccaccgaaatcgacgacgcgctgtcggtcgag
gacctgccgaacggcaacaagcgcgtcggcatccacatcgccgcgccgacgctgggcgtg
ccggccgactccgacatcgagaagatggtgctgtcgcggctgtccaccgcctacttcccc
ggcgacaagatcaccatgctgccggacgacgtggtgcaggcgttcacgctgcagcagggc
cgcgactgcccggcgttctcgctgtacgccgaggtgacgccggcattcgagccggtggcg
ttcgagaaccgcatcgagcgggttcacatcgccgccaacctgcgccacgccgagctggag
caggtgttcaacgaagaaacgctggccaacgatccgggcgtcgactacccgttcaagcgc
gagctggtgtggctgtggcagttcgccgaggcgctggagaagcggcgcggcaagcacgac
ccgagccgtccggtgcagcacgactacaatatcgacgtcgtcgacggcgtggtgtccatc
gccatccgcaagcgcggcgcgccgatggacaagctggtatccgagctgatgatcctggcc
aacagcgagtggggccggatgctggccgaggccgacatcccggcgatgtaccgcgcgcaa
agcatgggcaaggtgcggatgaccacccgtccggagccgcacatcggcctgggcgtcgcc
cagtacgcctggagcacctcgccgctgcgccgcgccagcgacttcatcaaccagcgccag
ctggaggcgatgatacgcggcgagaagccgccgttcgcccagggcgacgcgatgctgttc
gccatcctgcgcgacttcgacgccacctacggcgcctatctgtccttccaggacaagatg
gagcactactggtgcctgagctatctgctgcagcagaacatcaccgagccgaccgccacc
gtgatcaaggaggatctggtgcgcatcgacggcctgccgctgaggctgcgcatccccggc
ctgccggagctggcgcgcggcgaccgcgtgcagctgtcggtggtcaaggtggacctgctg
acgcaggagatcgagctgcgctacaccggccggctcgaccatgtagcacaagaggccgac
gacggcgagggctga

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