Chryseobacterium sp. T16E-39: CEY12_16925
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Entry
CEY12_16925 CDS
T04952
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
chry
Chryseobacterium sp. T16E-39
Pathway
chry03410
Base excision repair
chry03430
Mismatch repair
chry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEY12_16925 (recJ)
03430 Mismatch repair
CEY12_16925 (recJ)
03440 Homologous recombination
CEY12_16925 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chry03400
]
CEY12_16925 (recJ)
DNA repair and recombination proteins [BR:
chry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CEY12_16925 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CEY12_16925 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CEY12_16925 (recJ)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
ASK31692
UniProt:
A0A220SDW2
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All DBs
Position
complement(3724729..3726441)
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AA seq
570 aa
AA seq
DB search
MSQKWIYRPEPDEEIVDRLSSSLGFGTFESKLLVLRGIDNYQKAREFFKPNLTDIHNPFL
MADMQKAVERIATAIENGEKILVYGDYDVDGTTAVALMYLYLSKIVQKKYLDYYIPDRNS
EGYGISTEGIDFAKENGFSLIIALDCGIKAIDMISYAQNLGVDFIICDHHLPGEEIPNAV
AVLDPKRSDCRYPFKELSGCGVGFKLCQGLNTIYKIPDSELFELTDLLAISIAADIVSMT
GENRVLAKMGLKTLRKTRNLGLRLLIPEDKLSHFEISNIVFEIAPKINAAGRISHGKAAV
ELMVSDNLKHAHQIVSDIMGLNDERRELDMNSTLSALNQIIESQQETKLTTIVYHPEWNK
GVIGIVASRLIETYYKPTLVFTDGNNGEMVASARSVSDFDVHEALDLCSEYFLKFGGHHA
AAGLSMEKSKFEAFKEKFEKVVTEKIQEHQKEASIIIDSEIEIDEINREFINFHRKLAPF
GPHNMKPILSLKNQKLSGYIKTMGKDNNHVKFYIKQESTGRNIECVGFKLGQFSEDFRNK
YFDLAFTLEENHWKGNVTHYLNIKDVKFRE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaatggatttacagacctgaacccgatgaggaaattgtagatagattaagt
tcatcacttggttttggaacttttgaatctaaacttctcgttcttagaggaattgacaat
tatcaaaaggccagagaattctttaaacccaaccttaccgatatccacaatcctttttta
atggcagacatgcaaaaagcagttgagcgtattgcaaccgcaattgaaaatggagaaaaa
atactggtctatggcgattatgacgtagacggaacgactgctgtcgcattgatgtatctg
tacctcagcaaaatcgttcagaaaaaatatcttgattattacattccggacagaaattca
gaaggttatggaatttcaacagaaggaattgattttgccaaagagaatggtttttcttta
atcattgctttggactgcggtattaaagctattgacatgatcagctatgctcagaatttg
ggcgtagactttatcatttgcgatcaccatttacctggagaagaaatcccaaatgctgta
gctgttcttgaccctaaaagaagtgactgcagatatccttttaaggaactttccggatgt
ggagttggttttaaattatgtcagggtttaaatacaatttataaaattccggattctgaa
ttgtttgaattaacagatctgttggccatttcaattgctgcagatatcgtttctatgaca
ggcgaaaacagggttctggctaaaatggggcttaaaacccttagaaaaacaagaaacctg
ggattaagacttttaattcccgaggataaactttcccacttcgagatttccaatattgtt
tttgaaattgcaccaaaaattaacgctgcaggcagaatttcccatggaaaggctgcagta
gaactgatggtgtcggataacctgaagcatgcacaccagatcgtaagtgacattatggga
ttgaatgatgaaagacgtgagctggatatgaactctactctttcagcattaaatcaaatc
atagaatcccaacaggaaacaaaacttacaactatagtttaccaccctgaatggaataaa
ggggtcattggaattgtggcttccaggcttattgaaacctattataaacccactctggtt
tttacagatggaaataatggagaaatggttgcttcagcaagatcggtatctgatttcgat
gttcacgaagcattggatctctgttctgaatattttctaaaattcggaggacatcatgcc
gctgcaggactttcaatggagaaatctaaatttgaagcttttaaggaaaaattcgaaaag
gtcgtgactgaaaaaattcaggaacaccagaaagaagcatcgatcatcatcgattctgaa
atcgaaattgatgagatcaacagagagtttatcaattttcacagaaaattggctcctttt
ggtcctcataacatgaaacctattctttcattaaaaaaccaaaagttgtccggatatatt
aagacaatgggaaaagacaataaccacgttaaattttatatcaaacaggaatcaaccggt
agaaatatagagtgtgtcgggtttaaattaggtcaattctcagaagatttcagaaacaaa
tactttgacctggcattcactttagaggaaaatcactggaaaggaaatgtaacccattat
ttgaatataaaggatgtgaagtttagggaatag
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