Capra hircus (goat): 102178300
Help
Entry
102178300 CDS
T02910
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
chx
Capra hircus (goat)
Pathway
chx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102178300 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chx03041
]
102178300 (PRPF8)
Spliceosome [BR:
chx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102178300 (PRPF8)
Complex C
U5 SnRNP specific factors
102178300 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
102178300
NCBI-ProteinID:
XP_005693370
EnsemblRapid:
ENSCHIG00000017499
UniProt:
A0A452F0S3
LinkDB
All DBs
Position
19:complement(22553692..22584787)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcctggcccattagccccg
ctgccagactacatgtcggaggagaagctgcaggagaaagcccgaaaatggcaacaattg
caggccaagcgctatgccgaaaagcggaagtttggatttgtggatgcgcagaaggaagac
atgcctccagaacatgtcaggaagatcatccgagaccatggagacatgaccaacaggaag
tttcggcatgataaaagggtgtacttgggtgccctcaagtacatgccacatgcagtcctc
aagctcctggagaacatgcctatgccttgggagcagatccgggatgtgcctgtgctgtac
cacatcaccggagccatttcctttgtcaatgagatcccctgggtcattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgggaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aatatcctagatgtagagccactggaagccattcagctagagctggaccctgaggaggat
gcccctgtattggactggttctatgaccaccagccattaagggatagccggaagtatgta
aatggttccacttaccagcgctggcagttcacattgcctatgatgtccactctctaccgc
ctggccaatcagctcttgacagacttggttgatgacaattacttctatctgtttgatctg
aaggccttttttacatccaaggcacttaatatggccattcctggaggccccaaatttgag
cctcttgttcgagacatcaacctacaggatgaagactggaatgaattcaacgacattaac
aagatcatcatccggcagcctatccgcaccgagtacaagattgcgtttccttacctgtat
aacaacctgccgcaccatgtccacctcacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
catagacactctgtcaagagccaggaaccattgccagatgacgatgaggagttcgagctc
ccagagtttgtggagccctttctgaaggacacacccctctacacagacaatacagccaat
ggcatcgccctgctctgggccccccggcccttcaacctacgctctggtcgcactcgccgg
gccctagacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggcccccgaaagcccagaagaagaggtatctcttccgatccttcaaagccaccaaa
ttcttccagtctaccaagctggattgggtggaggtggggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaagaacctcaactatctgcacctggattac
aacttcaaccttaaacctgttaagacgctcaccaccaaggaaagaaagaaatctcgtttt
ggaaatgctttccatctgtgtcgagaagttctgcgtctaactaagctggtggtagacagt
catgtgcagtatcggttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atcttcgcccacgtggggcagctgacgggcatgtaccgctacaaatacaagctgatgcgg
cagattcgtatgtgcaaggacctgaagcaccttatctattatcgctttaacacgggtcct
gtagggaagggccctggctgtggtttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgctggagcgatggctgggcaacctcctggcccggcagttt
gaaggccgacactcaaagggggtggccaagacggtaacaaagcagcgagtggagtcacat
tttgaccttgagcttcgggccgctgtgatgcatgacatcctcgacatgatgcctgagggg
atcaagcagaataaggcccggacgatcctgcagcacctcagtgaggcctggcgctgctgg
aaggccaacattccgtggaaggtccctgggctgccaacaccgatagagaatatgattctt
cggtatgtgaaggccaaggctgactggtggaccaacaccgcccactacaaccgagaacgc
attcgccgcggggccactgtagacaagactgtatgcaaaaagaacctgggccgcctgact
cggctctacctgaaggcagagcaggagcggcagcacaactacctaaaggacggtccttac
atcacagcagaggaagcggtggcagtgtataccactactgtgcattggctggaaagccgt
agattctcgcccatccccttccccccgctctcctacaagcatgacaccaagttgctgatc
ttggctttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctagggctgatcgagcaggcctatgacaacccccatgaggcgctgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggac
ctctatagccacctggtgccagtgtatgatgtggagccgctggagaagatcactgatgcc
tacctggaccagtacctatggtacgaagctgacaagcgccgcctgttcccaccctggatc
aagcctgcagacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggatgtgtgggagacaagcgagggtgagtgcaatgtcatgctggagtcacga
tttgagaagatgtatgagaagattgacttgaccttgctcaataggctgctgcgtctcatc
gttgaccacaacatagctgactacatgacagccaagaacaacgtcgttatcaattacaag
gacatgaaccatacaaattcatatgggatcatcagaggcctgcagtttgcctctttcatc
gtacagtactatggcctggtgatggacttgcttgtgttgggattgcaccgagccagtgag
atggccgggccacctcaaatgccaaatgatttcctcagtttccaagacatagccaccgag
gctgcccaccccatccgtctcttctgcagatacattgatcgcatccatattttcttcagg
ttcacagcagatgaggctcgggaccttatccagcgttacctgacagagcaccctgacccc
aacaacgaaaacatcgttggctacaataacaagaagtgctggccccgagacgcccgcatg
cgcctcatgaagcatgatgtcaacctgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacgctcagtgactacagttcagtgggagaacagcttcgtatccgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggttttgagtgccgcatcctgcctaagtgc
cgcaccagctacgaggagttcacccacaaggacggggtctggaacctacagaacgaggtg
actaaagagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgcgtgcgccaaatcctgatggcctctggctccaccaccttcacgaagattgtg
aataagtggaacacagctcttattggccttatgacatactttcgagaggctgtggtaaat
acccaggagctcctggacttgctagtgaagtgtgagaacaagatccagacacgaatcaag
attggcctcaactccaagatgccgagtcgattcccccctgtcgttttctacacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtgctcattccccagtctgacctc
aggtggtccaagcaaacagatgtaggtatcacacacttccgttcaggaatgagccatgaa
gaagaccagctgattcccaatttgtatcgctacatacagccatgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccattgctcagaac
agacgactgaccctagaagatctagaagattcatgggatcgtggcattcctcgaatcaac
actctcttccagaaggacaggcacacactggcttatgataagggctggcgtgttcgaact
gactttaagcagtaccaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtaccgacatgatccaggccctgggtggc
gtggaaggcattctggaacacaccctcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaagccagtggttttgaggagtccatgaagtggaagaagctcaccaat
gctcagcgatcaggattgaaccagattcccaatcggagattcaccctctggtggtcccca
accatcaaccgagccaacgtgtacgtgggctttcaggtgcagctggacctgaccggtatc
ttcatgcacggcaagatccccaccctgaagatctctcttatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatagttatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactggagatcgagacagttcagaaggagacaatccacccccgaaagtcctat
aagatgaattcttcctgtgcagatatcctgctgtttgcatcctataagtggaatgtctcc
cggccctcattgctggctgactctaaggatgtgatggatagcaccaccactcagaagtac
tggattgacatacagttgcgctggggggactacgattcccatgacatcgagcgttatgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcgcccactggt
gtgctcattgccattgacctggcatataacctgcatagtgcctatggaaactggttccct
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaatcctgccttg
tatgtgttacgtgaacggatccgtaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaactacggtgagctcttctccaaccagattatctggtttgtg
gatgacactaatgtctacagagtgactatccataagacctttgaagggaacttgaccacc
aagcccatcaatggggccatcttcatcttcaacccacgcacagggcagctgtttctcaag
ataattcacacatctgtgtgggctggacagaagcgtttggggcagttggctaaatggaag
acagctgaagaggtggctgctctgatccgatctctgcccgtggaggagcagcccaagcag
atcattgtcactaggaaaggcatgctggatccactggaggtgcacttgctggacttcccc
aatattgtgattaaaggatcagagctccagctccccttccaggcttgcctcaaggtggag
aagtttggagatctcattcttaaagccactgagccacagatggttctctttaacctctat
gacgactggctcaagactatctcatcttacacggccttctcccgcctcatcctgatcctg
cgtgccctgcatgtgaacaacgaccgcgcgaaggtgatcctgaagccagacaagaccacg
atcacagagccgcaccacatctggcccactctgaccgacgaggagtggatcaaggtggag
gtgcagctcaaggaccttatcttggctgactacggcaagaaaaacaatgtgaatgtggca
tcactgacacagtcagaaattcgggacatcatcctggggatggagatctcagcaccatca
cagcagcggcagcagatcgctgagattgagaagcagacgaaggaacagtcgcagctcact
gcaacccagactcgcactgtcaacaagcatggtgacgaaataatcacctccaccaccagc
aactacgagacccagactttctcttctaagactgaatggagggtcagggccatctctgct
gccaacctgcacctaaggaccaatcacatctatgtttcatctgatgacatcaaggagact
gggtacacctatatccttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcaggatacctgtatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtaccacagtggggcactcaccagactgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccatact
cagcccaacgagtctccccagctgtcaccccaggatgtcaccacccatgctaagatcatg
gctgacaacccatcttgggatggcgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcaccctgacagcctacaagctgacccccagtggctatgaatggggccgccag
aacacagacaagggcaacaaccccaaaggctacctaccctcacactacgagagggtccag
atgctattgtcagaccgcttccttggcttctttatggtccctgcccagtcctcatggaac
tacaacttcatgggtgtccggcatgatcccaacatgaagtacgagctgcagctggcaaac
cccaaagagttctaccatgaggtgcatcggccctcccacttcctcaacttcgctctcctg
caggagggcgaggtctactctgcggaccgagaggacctctatgcgtag
DBGET
integrated database retrieval system
