Capra hircus (goat): 102186277
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Entry
102186277 CDS
T02910
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
chx04040
]
102186277 (SCN8A)
Ion channels [BR:
chx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102186277 (SCN8A)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ
GPHH
Lustrin_cystein
Mucin_bdg
Motif
Other DBs
NCBI-GeneID:
102186277
NCBI-ProteinID:
XP_017903233
EnsemblRapid:
ENSCHIG00000009567
LinkDB
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Position
5:complement(27738619..27939182)
Genome browser
AA seq
1991 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIERRIAESKLKKPPKADGSHREDDEDSKPKPNSDLE
AGKSLPFIYGDIPQGLVAVPLEDFDPYYLTQKTFVVLNRGKTLFRFSATPALYILSPFNL
IRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPDWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVVWPINFNESYLENGTKGF
DWEEYINNKTNFYIVPGMLEPLLCGNSSDAGQCPEGYQCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMATSAGTVSEDAIEEEGEEGAGSPRSSSEI
SKLSSKSAKERRNRRKKRKQKELSEGEEKGDPEKVFKSESEDGLRRKGFRLPDNRIGRKF
SIMNQSLLSIPGSPFLSRHNSKSSIFSFRGPGRFRDPGSENEFADDEHSTVEESEGRRDS
LFIPIRARERRSSYSGYSGYSQGSRSSRIFPSLRRSVKRNSTVDCNGVVSLIGGPGSHIS
GRLLPEVKIDKAATDDSATTEVEIKKKGPGSLLVSMDQLASYGRKDRINSILSVVTNTLV
EELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLF
MAMEHHPMTPQFEHVLAVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSL
MELSLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIF
AVVGMQLFGKSYKECVCKINQDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAG
QAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGVA
WIKLKVHAFMQAHFKQREADEVKPLDELYEKKANCIANHTGADIHRNGDFQKNGNGTTSG
IGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDVSSESDPEGSKDKLDDT
SSSEGSTIDIKPEVEEVPVEQPEEYLDPDACFTEGCVQRFKCCQVNTEEGLGKSWWILRK
TCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLL
KWTAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNESSEIRFEIED
VNNKTECEKLMEGNNTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKPD
EQPKYEDNIYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPLNKIQGIVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQ
MENILYWINLVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFG
MSNFAYVKHEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCNLDKEHPG
SGFKGDCGNPSVGIFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFY
EIWEKFDPDATQFIEYCKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILF
AFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRGH
LARRGFICKKTTSNKLENGGTHREKKESTPSTASLPSYDSVTKPEKEKQQRAEEGRRERA
KRQKEVRESKC
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggctgctcgcaccaccaggccctgatagtttcaagcctttcacccctgag
tcactggcaaacatcgagaggcgcattgccgagagcaagctcaagaaaccgcccaaggcc
gacggcagtcatcgggaggacgatgaggacagcaagcccaagccaaacagtgacctggag
gcagggaagagtttgcctttcatctacggggacatcccacaaggcttggtcgcggttccc
ctggaggactttgacccatactatctgacgcagaaaacctttgtagtattaaacagaggg
aaaactctcttcagatttagtgccacgcctgccttgtacattttaagtccttttaacctg
ataagaagaatagctattaaaattttgatacattcagtgtttagcatgatcattatgtgc
actattttgaccaactgtgtgttcatgacttttagtaaccctcccgactggtcgaagaat
gtggagtacacgttcacagggatttatacatttgaatcactagtgaaaatcattgcaaga
ggtttctgcatagatggctttacctttttacgggatccatggaactggttagatttcagt
gtcatcatgatggcatatgtgacagagtttgtggacctgggcaatgtctcagcgctgaga
acattcagggttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatc
gtgggcgccctgattcagtccgtgaagaagctgtcagatgtgatgatcctgacagtgttt
tgcctgagcgtctttgccttgatcggactgcagctcttcatggggaacctgcgcaacaag
tgtgtggtgtggcccatcaacttcaacgagagctatctcgaaaacggcaccaagggcttt
gactgggaagagtacatcaacaataaaacaaatttctacatagttcctggtatgctggaa
cctttgctctgtgggaacagttctgatgctgggcaatgtccagagggataccaatgtatg
aaggcaggaaggaaccccaactatggttacacgagctttgacacgttcagctgggccttc
ttggcattatttcgccttatgacccaggactactgggaaaacttgtatcaattaacctta
cgagcagctgggaagacgtacatgatcttcttcgtcttggtcatttttgtgggttctttc
tatctggtgaacttgatcctggctgtggtggccatggcttatgaagagcagaatcaggca
acactggaggaggcagagcagaaagaggccgagttcaaagcaatgttagagcagcttaag
aagcaacaggaagaggcacaggcggcggcgatggccacttcagcaggaactgtctcagaa
gatgccatagaggaagaaggtgaagaaggggcaggctccccccggagctcgtctgaaatc
tctaaactgagttccaagagtgccaaagagagacggaaccggagaaagaagaggaaacaa
aaggagctctctgaaggagaggagaaaggggatcctgagaaggtgttcaagtcagaatca
gaagatggtctgaggaggaagggctttcggctcccagacaacagaatagggaggaagttt
tccatcatgaatcagtcactgctcagcattccgggctccccattcctctcccgccacaac
agcaagagcagcatcttcagcttcagggggcccgggcggttccgggacccgggctcggag
aatgagtttgcggacgacgagcacagcacggtggaggagagcgagggccgccgggactcg
ctcttcatccccatccgggcgcgcgagcgccgcagcagctacagtggctacagcggctac
agccagggcagccgctcgtcgcgcatcttccccagcctgcggcgcagcgtcaagcgcaac
agcacagtggactgcaacggcgtggtgtccctcatcggcggccccggctcccacatcagc
gggcgtctcctgccagaggtgaaaatagataaggcagctactgatgacagtgctacaact
gaggtggaaattaagaagaaaggccctggatctctgttagtttctatggaccaactggct
tcctatggacgaaaggacaggatcaacagtatattgagcgttgttacgaatacactggta
gaagagctggaagagtctcagaggaagtgcccgccatgctggtataaatttgccaacact
ttcctcatctgggagtgtcacccttactggataaagctgaaggagattgtgaacttgatt
gttatggaccctttcgtggacctggccatcaccatctgcatcgtcctgaacaccctgttt
atggcaatggagcaccatcctatgacgccacagtttgaacacgtcttggctgtaggaaat
ctggttttcactggaattttcacagcggaaatgttcctgaagctcatagccatggatccc
tactattatttccaagaaggttggaacatttttgatggatttattgtctccctcagttta
atggaactgagtctagcagacgtggaggggctttcggtgctgcgatctttccgattgctc
cgagtcttcaaattggccaaatcctggcccaccctgaacatgctgatcaagattattgga
aattcagtgggtgccctgggcaacctgacccttgtcctggccattattgtcttcatcttt
gccgtggtggggatgcagctctttggaaagagctacaaagaatgtgtctgcaagatcaac
caggactgtgaactcccgcgctggcacatgcacgactttttccactctttcctcatcgtc
tttcgagtgctgtgcggggagtggatcgagaccatgtgggactgcatggaggtggctggc
caggccatgtgcctcattgtcttcatgatggtcatggttattggcaacttggtggtgctg
aacctgtttctggccttgcttctgagctcattcagtgctgacaacctggcggccacagac
gacgatggagaaatgaacaacctgcaaatctccgtgatccggatcaagaagggcgtggcg
tggatcaagctgaaagtgcatgccttcatgcaggcccatttcaagcagcgcgaggccgac
gaagtgaagcctctggacgagctgtacgagaagaaagccaattgcatcgccaaccacacc
ggcgccgacatccaccggaacggtgacttccagaagaacggcaatggcaccaccagtggc
atcggcagcagcgtggagaagtacatcatcgacgaggaccacatgtccttcatcaacaat
cccaacctgaccgtgcgagtgcccatcgccgtcggcgagtccgactttgagaacctaaac
actgaggacgtcagcagcgagtcggatcctgaaggcagcaaagataaactggacgacacc
agctcctctgaagggagcaccattgacatcaaaccagaagtagaagaagtccccgtggag
cagcctgaggagtacttggacccagatgcctgcttcacggaaggttgtgtccagagattt
aagtgctgccaggtcaacactgaggaagggctgggcaagtcttggtggatcctgcggaaa
acctgcttcctcatcgttgagcacaactggttcgagaccttcatcatcttcatgattctg
ctcagcagtggtgccctggcctttgaggacatctacatcgagcagaggaagaccatccgt
accatcctggagtacgctgataaagtcttcacctacatcttcatcctggagatgttgctc
aagtggacagcctacggctttgtcaagttcttcaccaatgcctggtgctggctggacttc
ctcatcgtggctgtctctttagtcagccttatagctaatgccctgggctactcggaacta
ggtgccataaagtcccttaggaccctaagagctttgagacccttaagagccttatcacga
tttgaagggatgagggtggtggtgaatgccttggtgggcgccatcccctccatcatgaat
gtgctgctggtgtgtctcatcttctggctgattttcagcatcatgggagttaacctgttt
gcggggaagtaccactattgctttaatgagtcttctgagatccgatttgaaattgaagat
gtcaacaataagacagagtgtgaaaagctcatggaggggaacaacacagaaatcagatgg
aagaacgtgaagatcaactttgacaatgttggggcaggatatctggcgcttcttcaagtg
gcaaccttcaaaggctggatggacatcatgtatgcagctgtagattcgcgaaagcctgat
gagcagcctaagtatgaggacaacatctacatgtacatctactttgtcatcttcatcatc
ttcggctccttcttcaccctgaacctgttcattggtgtcatcattgataacttcaatcaa
caaaagaaaaagtttggaggtcaggacatcttcatgaccgaagaacagaagaagtactac
aatgccatgaaaaaactgggctcaaagaagccgcagaagcccatcccccgccctctgaac
aaaatccaggggatcgtctttgattttgtcactcaacaagccttcgacattgttatcatg
atgctcatttgccttaacatggtgacgatgatggtggagacagatactcagagcaagcaa
atggagaacattctctactggatcaacctggtcttcgtcattttcttcacctgtgagtgt
gtgctcaaaatgtttgccttgcggcactactacttcaccattggctggaacatcttcgac
ttcgtggtggtcatcctctccattgtgggaatgttcctggctgatatcattgagaaatac
tttgtctccccgaccctcttccgagtcatccgattggcccgtattgggcgcatcctgcgt
ctgatcaaaggcgccaagggaattcgtaccctgctctttgccttaatgatgtccttgcct
gctctgttcaacatcggccttctgctcttcctggtcatgttcatcttctccatctttggg
atgtctaattttgcatacgtgaagcacgaggctggcattgatgacatgttcaactttgag
accttcggcaacagcatgatctgcctctttcagatcaccacgtcggctggttgggacggc
ctcctgctgcccatcctaaaccgcccccctgactgtaatttggataaggagcacccaggg
agtggctttaaaggagactgcgggaacccttcagtgggcatcttcttctttgtgagctac
atcatcatctccttcctgattgtggtgaacatgtacattgccatcatcttggaaaacttc
agcgtagccacagaggaaagcgcagaccctctgagcgaggacgactttgagaccttctat
gagatctgggagaagttcgaccccgatgccacccagttcatcgagtactgtaagctggca
gactttgcagatgccctggagcatcctctccgcgtgcccaagcccaacaccattgagctc
atcgccatggatctgccaatggtcagcggggatcgcatccactgcttggacatccttttt
gccttcaccaagcgggtcctgggagatagcggggagttggacatccttcggcaacagatg
gaggagaggttcgtggcgtccaatccttccaaagtgtcttatgagccaatcacgaccacg
ctgcggcgcaagcaggaagaggtatcagcagtggtcctgcagcgcgcctaccggggacat
ttagccaggcggggcttcatctgcaaaaagacaacttccaataagctggagaatggaggc
acccaccgggagaaaaaagagagcaccccatccacagcctccctcccctcctatgacagt
gtgactaaacccgagaaggagaaacagcaacgggcggaggaaggacgaagggaaagagcc
aaaagacaaaaagaggtcagagaatccaagtgttag
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integrated database retrieval system