KEGG   Capra hircus (goat): 102188002
Entry
102188002         CDS       T02910                                 
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
  KO
K15623  protein SSXT
Organism
chx  Capra hircus (goat)
Pathway
chx03082  ATP-dependent chromatin remodeling
chx05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102188002 (SS18)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    102188002 (SS18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:chx03036]
    102188002 (SS18)
Chromosome and associated proteins [BR:chx03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    102188002 (SS18)
   GBAF(ncBAF) complex
    102188002 (SS18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 102188002
NCBI-ProteinID: XP_017895153
LinkDB
Position
24:31001971..31073895
AA seq 417 aa
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSPSGPPPPPRAHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHIPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMSMQPNQGPVMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMSQVNQ
GNHMLGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNTQYGQQQDAYQGPPPQQGYPPQQQYPGQQGYPGQ
QQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPAQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgtccgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgccgcg
attcagaagatgctggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgctgcataccaacttggtctac
cttgctacaatagcagattctaatcagaacatgcagtctctcttaccagcaccacccaca
cagaatatgcctatgggtcccggagggatgagtccgagcggccctcccccacctccgcgc
gctcacaacatgccttcagatggaatggtaggtgggggtcctccggcaccacacatgcag
aaccagatgaacggccagatgcctgggcccaaccatatccctatgcagggacccggaccc
aatcaacttaatatgacgaatagttccatgaacatgccttcaagtagccacgggtccatg
ggaggttacaaccattccgtgccgtcatcccagagcatgccagtacagaaccagatgacc
atgagtcaagggcagcccatgggaaactacggccccagaccaaatatgagtatgcaacca
aaccaaggtccagtgatgcaccagcagcctccttctcaacagtacaacatgccccaggga
ggtgggcagcattaccaaggccagcagccaccaatgggaatgatgagtcaagttaaccaa
ggcaatcatatgctgggtcagaggcagatccctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaacaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaatacgcagtatggccaacagcaagatgcctaccaaggaccacct
ccccagcagggctacccaccccagcagcagtacccagggcagcaaggctacccaggacag
cagcagggctacggtccttcacagggtggcccaggtcctcagtatcctaactacccacag
ggacaaggtcagcaatatgggggttacagaccagcacagcctggacccccacagccgccg
cagcagaggccttatgggtacgaccaggggcagtatggaaactaccagcagtga

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