Citrus x clementina (clementine): CICLE_v10014570mg
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Entry
CICLE_v10014570mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
CICLE_v10014570mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10014570mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
CICLE_v10014570mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS
PAS_3
NANM
F-box-like
PAS_4
F-box
PAS_8
Motif
Other DBs
NCBI-GeneID:
18052906
NCBI-ProteinID:
XP_006448153
UniProt:
V4TLP4
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MKPLAFRTQRKEHTNRKIMTSKKDKEEEEEGEGVIQGSGKRQKCSFEGGGGGGGDDTELS
LKPGLLFYPTTPTSFVVADAFDPDFPIIYVNKVFEIFTGYRADEVLGRNCRFLQYRDPRA
QRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFKKDGTPLVNRLRLAPIRDDDGTVTHIIG
IQIFSEAKIDLNHVSYPVFKENCNQQYDQSAQYFSGGHSPLSQHQDICGILQLSDEVLAH
NILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLA
RELTTLEAVCWRKFTVRGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAA
NPEWRRVSVKSSPPGRWGHTLSNLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWIEVS
GGAPPLPRSWHSSCIIEGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPMWREIPTSWSPPS
RLGHSLSVYGRTKVLMFGGLAKSGHLRLRSGESYTIDLGDEEPQWKQLECNAFTGVGSQS
AVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKF
AWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASKQDSDQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccacttgcatttcgcacacagaggaaagagcacacaaatcgtaaaatcatgaca
agcaagaaagataaagaagaggaggaggagggggagggcgtgattcaaggctcgggtaag
aggcaaaaatgtagtttcgaaggaggaggaggaggaggaggagacgacactgagctgtcg
ctaaagccggggctgttattttacccgacgacgcctacatcttttgtggttgccgatgct
ttcgaccccgattttccgattatttacgtcaacaaagtcttcgagatcttcactggttac
cgcgctgacgaggtcctcggtcgaaactgtcggttcttacagtaccgggatcctcgtgct
caaagacggcaccctttggtcgatcctgttgttgtttctgagatcagaagatgtcttgaa
gaaggcattgaattccaaggggagctactcaacttcaagaaggatggtaccccgttggtg
aacagacttagacttgcacccatacgtgatgatgatggaactgtaacacacataattggt
attcaaatcttttctgaagcaaagatagatcttaatcatgtgtcttatccagtatttaaa
gagaactgtaatcaacagtatgatcagtcagctcaatatttttcgggtggacattcacct
ctcagtcagcatcaagatatatgtggaatacttcaactctctgatgaagttttggctcac
aacattctctcacgcttgacaccaagagatgtagcatctattggatctgtgtgtagaagg
attcgccaattaacaaagaatgaacatgtaaggaagatggtatgtcaaaatgcatgggga
cgagaggtcacgggtgcattagaattgatgaccaagaagttaggctggggccgtcttgct
agggagctgacaaccctcgaggcggtttgctggagaaaatttaccgttagaggagcagtg
gagccttcacgttgcaatttcagtgcatgtgctgctggcaatcgacttgttctgtttgga
ggcgaaggagttaacatgcagccaatggacgacacatttgttttgaaccttgatgctgca
aatccagaatggcgacgggtgagtgtgaaatcatctccaccagggcgatggggccacacc
ttatccaatctgaatggttcctggttagtagtatttgggggatgcggaagacaaggattg
ctcaacgatgtgtttgttctggacttggatgccaaacagccaacatggatagaagtttct
ggcggagctcctcctcttcctagatcttggcatagctcttgcataattgaaggttccaaa
ttggttgtctcaggcggctgcacagatgccggggtacttctcagtgacacatacctatta
gatctcactacagacaagccaatgtggagagaaattccaacttcatggtcacctccttct
cgattaggacattctctctcagtatatggtcggacaaaagtccttatgtttggtgggctt
gcaaagagtgggcacttgcggctgcgttcaggtgagtcctacaccattgatttgggagat
gaagagccacagtggaagcaactagagtgcaatgcattcactggtgtaggcagtcagagt
gctgtggttccccctcctagacttgaccatgttgcagttagcatgccttgtgggagaatt
attatatttggtggttccattgctgggctgcactctccttctcagctcttccttttagat
ccatcggaggagaaaccatcgtggagaattcttaatgttcctggtcaaccgcctaaattt
gcttggggtcatagcacctgtgtggtaggagggaccagagttctggttttgggtgggcac
accggagaggagtgggtacttaatgaattgcatgagctgtgcttagcgagcaaacaagat
tcagatcagtga
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