KEGG   Citrus x clementina (clementine): CICLE_v10018122mg
Entry
CICLE_v10018122mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CICLE_v10018122mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10018122mg
   03041 Spliceosome [BR:cic03041]
    CICLE_v10018122mg
   03032 DNA replication proteins [BR:cic03032]
    CICLE_v10018122mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     CICLE_v10018122mg
Spliceosome [BR:cic03041]
 Complex A
  U1 snRNP components
   Sm proteins
    CICLE_v10018122mg
  U2 snRNP components
    CICLE_v10018122mg
 Complex B
  U1 snRNP components
    CICLE_v10018122mg
  U4/U6.U5 tri-snRNP components
    CICLE_v10018122mg
 Complex C
  U2 snRNP components
    CICLE_v10018122mg
DNA replication proteins [BR:cic03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     CICLE_v10018122mg
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 18052106
NCBI-ProteinID: XP_006448808
UniProt: V4TNG4
LinkDB
Position
Unknown
AA seq 286 aa
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN
TNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSASAVVGPGIGRAAGRGVPA
APLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPIPQLSAPPMTYPATSGGPPVIRPPGQM
PPPVYPGQGPPMARGPPPQGPPQGFGVRPPQQFPMPPQQFGQRPMVPPPPGPMMRGPPSG
PPRPGMPNAPPPRPGMPPPPGAPVFRPGMPPPPPNAQQQQQNQQQQ
NT seq 861 nt   +upstreamnt  +downstreamnt
atgtcgatgtcaaagagttcgaagatgcttcaattcataaattaccggatgcgcgtcacg
atccaagacggccggcaacttgtcggcaaattcatggctttcgaccgccacatgaacctc
gtcctcggcgactgcgaagagtttcgtaagcttcctcctgccaagggaaagaagaacaac
actaacgaggagcgcgaggaccgccgcactcttggccttgtccttctcaggggcgaagag
gtaatttccatgaccgtcgaaggccctcctcctcccgaagagtcacgtgccaaggccgtg
tccgcatctgccgttgttggccctggcattggtcgcgctgctggtcgtggtgtccccgct
gctccccttgttcaagctcagcctggcctcgctggccccgttcgtggtgttggtgggccc
gctcccggcatgatgcagccacagatctcgcggccgccaataccacaactctccgctcca
ccaatgacttacccagctacttcaggtggaccccctgtgattcgaccgccgggtcagatg
ccgcctcctgtttacccaggtcagggtccaccaatggcgcggggtccaccaccgcagggg
ccgccacagggttttggtgtgaggccacctcagcagttccctatgccgcctcagcagttt
gggcagagacctatggtcccgccgccgcctgggccgatgatgagaggacctccatctggc
ccgccaaggccagggatgcccaacgcacctcctcctcgtcctgggatgcctcctccacct
ggtgctcctgtctttcgtccgggtatgccacctcctccaccaaatgctcagcagcagcag
cagaatcagcaacaacagtga

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