Citrus x clementina (clementine): CICLE_v10018122mg
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Entry
CICLE_v10018122mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10018122mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10018122mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10018122mg
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v10018122mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
CICLE_v10018122mg
Spliceosome [BR:
cic03041
]
Complex A
U1 snRNP components
Sm proteins
CICLE_v10018122mg
U2 snRNP components
CICLE_v10018122mg
Complex B
U1 snRNP components
CICLE_v10018122mg
U4/U6.U5 tri-snRNP components
CICLE_v10018122mg
Complex C
U2 snRNP components
CICLE_v10018122mg
DNA replication proteins [BR:
cic03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
CICLE_v10018122mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
18052106
NCBI-ProteinID:
XP_006448808
UniProt:
V4TNG4
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN
TNEEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSASAVVGPGIGRAAGRGVPA
APLVQAQPGLAGPVRGVGGPAPGMMQPQISRPPIPQLSAPPMTYPATSGGPPVIRPPGQM
PPPVYPGQGPPMARGPPPQGPPQGFGVRPPQQFPMPPQQFGQRPMVPPPPGPMMRGPPSG
PPRPGMPNAPPPRPGMPPPPGAPVFRPGMPPPPPNAQQQQQNQQQQ
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcaaagagttcgaagatgcttcaattcataaattaccggatgcgcgtcacg
atccaagacggccggcaacttgtcggcaaattcatggctttcgaccgccacatgaacctc
gtcctcggcgactgcgaagagtttcgtaagcttcctcctgccaagggaaagaagaacaac
actaacgaggagcgcgaggaccgccgcactcttggccttgtccttctcaggggcgaagag
gtaatttccatgaccgtcgaaggccctcctcctcccgaagagtcacgtgccaaggccgtg
tccgcatctgccgttgttggccctggcattggtcgcgctgctggtcgtggtgtccccgct
gctccccttgttcaagctcagcctggcctcgctggccccgttcgtggtgttggtgggccc
gctcccggcatgatgcagccacagatctcgcggccgccaataccacaactctccgctcca
ccaatgacttacccagctacttcaggtggaccccctgtgattcgaccgccgggtcagatg
ccgcctcctgtttacccaggtcagggtccaccaatggcgcggggtccaccaccgcagggg
ccgccacagggttttggtgtgaggccacctcagcagttccctatgccgcctcagcagttt
gggcagagacctatggtcccgccgccgcctgggccgatgatgagaggacctccatctggc
ccgccaaggccagggatgcccaacgcacctcctcctcgtcctgggatgcctcctccacct
ggtgctcctgtctttcgtccgggtatgccacctcctccaccaaatgctcagcagcagcag
cagaatcagcaacaacagtga
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