Citrus x clementina (clementine): CICLE_v10018489mg Help Entry CICLE_v10018489mg CDS       T02982                                  Name (RefSeq) hypothetical protein   KO K16250   DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6] Organism cic  Citrus x clementina (clementine) Pathway cic03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cic00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CICLE_v10018489mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cic03021]     CICLE_v10018489mg Enzymes [BR:cic01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CICLE_v10018489mg Transcription machinery [BR:cic03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Pol IV and V specific subunits      CICLE_v10018489mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Motif Other DBs NCBI-GeneID:  18048918 NCBI-ProteinID:  XP_006440521 UniProt:  V4TV64 LinkDB All DBs Position Unknown AA seq 1443 aa AA seqDB search MDNEFCEEGLEVPSGILTGISLGISTDTEKEKLSVMEIGAVSEVTNPRLGLPNPTNECSS CGAKDRKACEGHFGFIKFPFTILHPYFLSDIAKLLNSICPKCKTIRKERQKGAGSSRKEQ PRVCKYCVRNPAQWYPRMRFKLSSKDLSGKTAIIVEIDEKLSKKNKKLPDDYWGFIPFDA QQEENSVKPNRKVLSCKQVSYLLKDVDPSIREEFILSKDAPFLKCFPVTPNNHRVTEVPH AFSHEKKLFFDNWTRHLKKMVDYRGRDIELSHLVQDCLKISKLHLDKSSRKDSAEVRQKK NIDISNSSGLRWIKDVVLGKRNDDCFRMVVTGDPNIKLKEIGIPCQVAERLQISERLNSW NWERLSVCISFRLLEKGELYVCRKGGLVRIRRIDALELGDIIYRPLTDGDIVLINRPPSI HPHSLIALTVKVLPISSVVTINPLCCSPFHGDFDGDCLHGYIPQAIGARVELTELVALDK QLINQQSGRNLLSLGQDSLTAAHLLMEDGVLLSHLQMQQLQMFCPHRFLSPDIFKISKDS VWSGKQLFSMLLPPDFEYTFPSKDVYISGGKLISAEGSSWLRDYEGNLFQYLIKRYRDKV LDFLYAAQEVLCEWLSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLREAQDTCNFQQLM VDSHMNFLMSAKDSESTRSLQGEHLSYEKQRSAALSQASVDAFKHVFWDIQNLAYKYGSK DNSLLGMFKAGSKGNLLKLVQHSLCLGLQHSLAPLSFRFPHELSCAAWNRLRAGDNTECA KSYIPSAVVENSFLTGLNPLECFIHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLCTAYD GTVRNAYGNQIVQFSYNIEGTSTPTGEIGDQPVGSLSACAISEAAYSALDQPISLLETSP LLNLKNVLECGSKKSNADQTMSLFLSNKLGKRRHGFEYGALEVKNHLECLMLSDIVSTSM IIYSPQTGSMKHFSPWICHFHVRKEIMKRTGLKEHSIIDSLYRQCKAARTELKISVPDML ISNKDCSSINMQKECNDAFCVTVMIVENFKRTSIDLETIQMWVMPFLLKTVVKGFREIKK VDILWKDKQKASKSHDDSFGELYLRVSMSGQCHITSLWSALMNDCHQIMDMIDWTRSHPD NIRSFCLAYGIDAGLQFFLTNLESAISDTGKNILPEHLLIVANTLSATGEFVGLNAKGLA LQRKHSSVSSPFVQAFFSNPGASFIKAAKAGAVDNLQGSVDALGWGKVPSVGTGGHFDII YSGEGRTLSKPVDVYNLLSTPVSSKQNEKLKVCKAQGLISDKCGAKFGDFAFKGLGNLDF ETISRGVLRKSWTYNDVLRLSNALKKILHKYSIGQRLSEKDKTTVIRALYFHPRRNEKLG IEPPDIEVTYHPEHQNSRCFSLVREDGSIEDFSYHKCVIGALEIIAPEKAEIYRAKWKRL GTA NT seq 4332 nt NT seq  +upstreamnt  +downstreamnt atggacaatgaattctgtgaagaagggctggaagtgccctctggtatcctgactgggata tctcttggaatttcaacagacactgaaaaagaaaagttatccgtaatggaaattggtgca gtcagtgaggtcaccaatcctaggttggggcttccgaacccaactaatgagtgctcctca tgtggagctaaagataggaaagcctgcgaagggcactttggctttatcaagtttccattc acaatactacatccatattttctatcagacattgcaaagcttttaaatagtatctgtcct aagtgcaaaactatccggaaagaaagacaaaagggggctggttcttcacggaaagaacag ccaagggtttgcaaatattgtgttcgaaatcctgcacaatggtacccaagaatgcggttt aaactttcatctaaagatctctcagggaaaactgctattattgttgaaatagatgaaaag ctgtcaaagaagaataaaaaattgcctgatgattactggggttttattccatttgatgct caacaagaagaaaatagtgtgaaaccaaacagaaaggttttatcatgtaaacaggtaagt tatttgttgaaagatgttgatccaagtatcagagaggagtttattttgagtaaagatgct cccttcctcaaatgtttcccagtaacaccaaataatcaccgtgtgacagaagttccacat gcattttcgcatgaaaagaaattgttttttgataattggaccaggcatttaaagaaaatg gttgactacagagggagagatattgaattgagtcatctcgttcaggactgcttgaagata tcaaagttacacttagacaagtcatcgagaaaagattctgctgaggtccgacaaaagaag aatattgatatttccaacagctctggtctcagatggatcaaagatgttgttcttgggaag agaaatgatgattgttttcgcatggttgttactggtgaccctaacattaaactcaaagaa attggtataccctgtcaagttgcagagaggttacaaatttctgaacgtctgaactcttgg aactgggaaaggctaagtgtctgcattagttttcgtcttcttgagaaaggggagctttat gtttgcagaaaaggtgggctggttcgtattcgacgtattgatgcacttgaattaggggat ataatttataggcccctaactgatggtgacattgtattgataaacaggccaccctccata catccgcactccctgattgctctaacagtgaaggtccttccaataagctcagtggtcaca ataaatccactttgttgctcccctttccatggggactttgacggtgactgccttcatgga tatattcctcaagcaattggtgctcgagttgagctcactgagcttgttgctttagataag caactaattaatcagcagagtggtaggaacttgctctcacttggtcaagatagtttgact gctgctcatttactcatggaagatggtgttctattgagccatttgcaaatgcagcagctg caaatgttctgccctcatcgatttctgtcacccgatattttcaaaatttcaaaggatagt gtttggtctgggaagcagttattcagcatgctcttgcctccagattttgagtatacattt ccatcaaaagatgtttatattagtggtgggaagctcatatctgctgaaggatcttcttgg ctgcgtgactatgagggaaatcttttccaatatcttatcaagcgctatcgggataaagtt cttgacttcttgtatgctgctcaggaagttctttgcgagtggctgtcagttaggggcatg actgtttcactctcagacttgtacctcgcttctcactcatgctcccgaaaaattctgatg gatgaaattttttatggtttgcgagaagctcaggacacttgtaattttcaacagctgatg gtggattctcatatgaattttcttatgagtgctaaagatagtgaaagcaccaggtctttg caaggggagcacctgtcttatgaaaagcagagatcagccgctctcagtcaagcttctgtt gatgcttttaagcatgtgttctgggatatccagaatttagcctacaagtatgggagtaag gacaactcattgttgggtatgtttaaggcaggaagcaagggtaatttactaaagctagtt cagcatagcttgtgtcttggtctgcaacactcattagccccattgtcatttagatttccc catgaactctcttgtgctgcttggaacaggctaagggctggggataatacagaatgtgcc aagtcttatataccatccgctgttgttgaaaattcctttttgacaggattgaatccctta gaatgttttattcattcagtaacaagtcgagacagttcttttagtgacaatgctgatctt ccgggtactcttactcgaagacttatgttcttcatgcgtgatctgtgcacagcatatgat ggaacagtgagaaatgcttatgggaatcagattgttcaattctcttataatattgagggg acatctactccaacaggtgagatcggtgaccaacctgttggttcactatctgcttgcgct atttctgaggcggcatacagtgcattagatcaacctatcagtttgctcgaaacttcaccg ctgctaaatctaaagaacgtactggaatgcgggtcgaaaaaaagcaatgcggaccagact atgtctctattcttatccaacaaactggggaaaaggaggcatggttttgaatatggagcc ctggaagtcaagaatcatttggagtgcctaatgttgtcagatattgtttctacttccatg ataatctactctccacagacgggcagcatgaagcattttagtccttggatatgccatttc catgtgcgcaaggaaatcatgaagaggacaggattgaaagaacattccattattgattcc ttgtaccggcagtgtaaagccgctagaacagaattgaaaatcagtgttcctgatatgctc atttcaaacaaggactgttcttcaattaacatgcagaaggaatgcaatgacgcattctgt gtcactgtcatgattgttgaaaacttcaagagaacttccatagatttggagacaattcaa atgtgggtgatgcctttccttctgaaaacagtagtcaaaggattccgggagattaagaag gtggatattttatggaaggataaacaaaaagcatcaaaatcccatgacgattcattcggt gagctctatctgagggtttctatgtctgggcaatgtcatataacaagtttgtggagtgca cttatgaatgactgccaccagataatggatatgattgactggacacgcagtcatccagat aatattcgcagtttctgtttggcctatgggattgacgctgggttacaattttttctcact aatttggagtccgctatatctgacactggcaagaacatacttcctgaacatttgcttatt gttgctaatactctgtcagctacaggagagtttgttggcttaaatgcaaaaggcttggct ctacaacgaaaacattcttctgtatcgtcaccttttgtgcaagcattcttttctaatcct ggtgcttcctttattaaagctgcaaaggcaggagctgtggataatcttcaggggagtgta gatgcactaggatggggaaaggtcccttctgtaggcaccggcggacactttgatattata tattctggggagggacgcacactttccaagccagtggatgtatataacctcctgagcacc ccagtcagttctaagcagaatgaaaaacttaaagtatgcaaagctcagggccttatatct gacaaatgtggtgctaagtttggtgattttgcgtttaaagggctgggaaacctggatttc gagaccatatctagaggggttttgagaaaatcttggacgtataacgatgtcctacggctc agtaatgccttaaagaaaatattacacaaatattcaattggtcagaggttaagtgaaaag gacaaaacaactgtgataagggctttatattttcatcctcgacgcaatgaaaagcttgga attgagcctccagatatagaggttacctatcaccctgaacatcagaattcacgttgcttt tcattggtaagagaagatggctcaattgaggacttctcatatcacaagtgtgttattggt gctcttgagatcattgcccccgagaaagcagaaatctatcgggcaaaatggaaacgactt ggtactgcatga

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