Citrus x clementina (clementine): CICLE_v10027772mg
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Entry
CICLE_v10027772mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v10027772mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10027772mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
CICLE_v10027772mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
18035021
NCBI-ProteinID:
XP_006423032
UniProt:
V4S769
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MEDDEEILSDSDPSDSSDRCTIDREDADYNDDNDDGDEEASVADSAPSDEDRKSKNVDAL
VRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYDNGNDQLARRLCARKRFVPWGS
SRPVLVTITNRLDLPRTVENNVIEENFTLPPGVDPLVLWQPEEPQNDGGNLVPITVDPLL
VRFLRPHQREGVQFMFECVSGLLNAAGIHGCILADDMGLGKTLQSIALLYTLLCQGFDGK
PMVKKAIIVTPTSLVSNWEAEIKKWVGGRVQLIALCESTRDDVVSGIDSFTDPCSSLQVL
IVSYETFRMHSSKFSCSESCDLLICDEAHRLKNDQTLTNRALAALSCKRRILLSGTPMQN
DLEEFFAMVNFTNPGILGDAAYFRRYYETSIICGREPTATEEEKKLGIERSSELSAKVNQ
FILRRTNALLSNHLPPKIIEVVCCKLTPLQSELYNHFIHSKNVKRAISEETKQSKILAYI
TALKKLCNHPKLIYDTIKSGNPGTTGFEDCIRFFPPEMFSGRSGSWTGGDGAWVELSGKM
HVLARLLGHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNH
FNDPSKNEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFI
YRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQTDSSATQGNFLSTEDLRDLFTFHDDVRSE
IHENMHCTRCQNYDDGAESIGEGDETNSANKNDQSDQEVTDIGGFAGLAGCLHKLKSSEK
QLGTPLEEDLNNWGHHFYSMSVPDAILQASAGDEVTFVFTNQVDGKLVPIESKVSPKMQA
TEGNKNPNNHITNPKPKLDQRSKLLSQHHKLLKDVPSLENSAKFSLSASSQPKSMRTSLK
GAIKPKLSFGNQLPLKRFSPDNVEHDDDFE
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacgaagaaattctctcagattccgatccatctgattcaagcgacagatgc
accattgatcgcgaagacgccgattataacgatgataacgatgacggtgacgaagaagca
tccgtggcagattctgcgccgtccgatgaagatcgaaagtcgaagaacgtcgacgctctc
gtgagaggcaaccttgttgtaaaaagacaatcactgcttccaagagttctttcagtgaca
gaaggggcggctgtttgtaggaagcctttcaaacctccctgctctaatggctatgacaat
gggaatgaccagcttgctcgtcgtctttgtgcccgcaaacggtttgttccctggggctct
tctcggccagtgttggttacaataaccaaccgattagatttaccaaggactgttgagaac
aatgtcatagaggaaaatttcactttgccaccaggagttgatcctctggtgctctggcaa
cctgaggaacctcaaaatgatggtggtaacttagtgccaataactgttgatccattgctt
gttcgtttccttcgaccccatcagagagaaggtgttcagttcatgtttgaatgtgtttca
gggctattgaatgctgctggtatacatggatgcattcttgctgatgatatggggttggga
aaaactttgcagtcaatcgcattactgtatactcttttatgtcaaggtttcgatggaaag
ccaatggttaaaaaggccattattgtcacaccaaccagtcttgtaagtaattgggaggct
gaaatcaaaaagtgggttggaggaagagttcaacttatagctctctgtgaaagcacaaga
gatgatgttgtctctggaattgatagtttcacagatccctgcagctctctacaggtattg
attgtttcatatgaaacatttcggatgcattcatcaaaatttagctgcagtgagtcctgc
gaccttcttatatgtgatgaggctcacaggctgaaaaatgatcagacactaacaaatcgg
gcattggctgctctctcatgcaagcgtagaattttgttgtctggaactcctatgcagaat
gatcttgaagagttctttgccatggttaactttactaatcctgggatattaggtgatgct
gcatattttcgccgttattatgagacatcaattatttgtggaagagaacctactgctact
gaagaagagaagaagctaggtattgagcgctcttcagaactaagtgcaaaagtgaatcag
tttatattgagaaggactaatgctttgctgtcaaatcacttgccaccaaagataattgaa
gtcgtatgctgcaagttgactcctctccagtcagagctatataaccactttatacattcc
aaaaatgttaaacgggctatttcggaagaaacaaagcaatccaagattttggcttatatc
acagctcttaagaagctctgtaatcatcccaagcttatctacgatactataaaaagtgga
aatccaggaaccactggatttgaggactgtatacgttttttccctccagagatgttctct
ggaagatctggatcatggactggaggtgatggggcttgggttgaactgtctggaaaaatg
catgtcttagcccggttactgggccatctacgtcagagaactgatgaccgaattgttctg
gtctcaaattatactcagacactggatctatttgctcaattgtgtcgtgaaagaaggtat
ccatacttgaggctggatggaactacatcaatcagcaaaagacagaagttagtgaatcac
tttaatgacccttcaaagaatgagtttgtttttctcttaagcagcaaggctggtggctgt
ggcctcaatttaattggtggtaatcgacttgtgttgtttgatcctgattggaatccagcc
aatgataaacaagctgctgcaagagtttggagggatggacaaaagaagagggtattcatc
taccgttttctgagtactggaaccattgaagaaaaggtataccagcgtcaaatgtctaaa
gaagggcttcaaaaagttattcagcaggagcaaacagatagctctgcaactcagggaaac
tttctttcaaccgaagatttacgtgacctgtttacatttcatgatgatgtgaggtctgaa
attcatgaaaatatgcattgcactcgttgccagaattatgatgatggagctgagagcata
ggagagggagatgaaaccaactcagcaaacaaaaatgatcagtctgatcaagaagttacc
gacataggtggttttgcaggacttgctggatgtttgcacaagttgaagagctcagaaaaa
cagttaggaactcctttggaagaagatttaaataactgggggcaccatttttactccatg
tcagtgcccgatgctatacttcaagcctcagctggtgatgaggtcacattcgttttcact
aaccaagtagacgggaagcttgtgccaattgaatcaaaagtaagcccgaagatgcaagcg
acagaaggaaacaagaacccgaataatcatattactaatcccaagccgaagctggaccaa
aggtccaagttattatctcaacatcataagctactaaaagatgttccttcactcgaaaat
tcggcgaaattctcattatctgcctcttcccagccgaaatcaatgagaacttctctaaaa
ggtgcaataaagcctaaactctcttttggaaatcaattgccattgaaaagattttctcct
gataatgtagaacatgatgatgactttgagtaa
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