Citrus x clementina (clementine): CICLE_v10027988mg
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Entry
CICLE_v10027988mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00730
Thiamine metabolism
cic01100
Metabolic pathways
cic01240
Biosynthesis of cofactors
Module
cic_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CICLE_v10027988mg
Enzymes [BR:
cic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CICLE_v10027988mg
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
18035356
NCBI-ProteinID:
XP_006425025
UniProt:
V4RUB9
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All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MASVHATTTSIVCKNGIHSTPAKLPSTSFLPGFDVVACKKEICSSMSSGIRAALTFDPPT
ANSKNTGQRKHTADPASPDFLPLPSFEQCFPKSSKEYREITHEESGHILQVPFRRIHLSG
DEPNFDTYDTSGPQNISPRVGLPKLRKDWIDRREKLGAPRYTQMYYAKQGVITEEMLYCA
TREKLDPEFVRAEVARGRAIIPSNKKHLELEPMIVGRNFLVKVNANIGNSAVASSIEEEV
YKVQWATMWGADTVMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVNGIAENLSWE
VFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLAYHKENFAY
QHWDEILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWDKDVQVMNE
GPGHIPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGTALL
CYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKGHPLAQTWDDALSKARFEFRWMDQF
ALSLDPMTAMSFHDETLPSEGAKVAHFCSMCGPKFCSMKITEDVRKYAEEHGYGSAEEAL
QQGMDAMSAEFLAAKKTVSGEQHGEVGGEIYLPESYISSSQNSRTI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtgcatgcaacaacgacttcaattgtgtgcaagaatggtatccattccaca
cctgcgaagcttccaagtacttccttcttgccggggtttgatgtggttgcatgtaagaag
gaaatatgttcttccatgagctcaggaattagagccgctttgacctttgatcccccgaca
gcaaattccaaaaacaccggacaaagaaagcatactgctgatcctgcttctcctgatttt
ctaccacttccatcatttgagcagtgttttccaaagagctccaaggagtacagggaaatt
actcatgaagaatccggacacatacttcaagtgccctttcgacggattcacttgagtggg
gatgaaccgaacttcgacacctatgacactagtggtcctcaaaacattagccctcgagtt
ggacttcctaaactgcggaaagactggattgacaggcgtgagaagttaggggcaccaagg
tacacccaaatgtactatgccaagcagggagtaataacagaggaaatgctgtattgtgct
actcgtgagaagcttgacccggaatttgtgagggcagaggttgctcgtggccgagcaatc
attccttccaacaagaagcacttggaactagaaccaatgatagtcggaagaaattttttg
gtcaaagttaatgcaaatattggtaattctgctgtagctagctctattgaggaagaagtt
tacaaggttcaatgggcaaccatgtggggtgccgacactgttatggatctgtctacaggc
agacacattcatgagacgcgtgagtggattttacgtaactctgctgtgccagtgggaact
gtgcccatatatcaagcacttgaaaaagttaacggaattgctgaaaatcttagctgggag
gtcttcagagacaccctgattgaacaagcagagcagggagtagattacttcacaatccat
gctggagtgcttttgcggtacatccctttaacagcaaagcgcatgactggaatcgtttcc
cgtggaggatccattcatgcaaagtggtgtttagcgtatcacaaagaaaactttgcttat
cagcactgggatgaaatacttgatatttgtaatcagtatgatgtggctttgtcaattggt
gatgggctgagacctgggtccatatatgatgctaatgacactgctcagtttgcagagctt
ttaactcaaggagaactgacccgtagagcatgggacaaggatgtacaggtgatgaatgaa
ggaccgggacacattccaatgcacaagatccctgaaaacatgcaaaaacagttggagtgg
tgtaatgaagcgcctttctacactcttggtccattgacaactgatattgctcctggttat
gatcacatcacctcagccataggggctgccaacattggggctctaggcactgcacttctc
tgttatgtaacgccaaaagaacaccttggattgccaaatagggatgatgtgaaggctggg
gttatagcatataagatagctgctcatgccgccgatttagccaaaggccacccacttgct
cagacatgggatgatgcattaagcaaggcaagatttgaattccgatggatggaccaattt
gcattgtctttggaccccatgactgcaatgtccttccatgatgaaaccctgccatcagaa
ggtgcaaaagttgcacatttttgctctatgtgtggtcccaagttctgctcgatgaagata
acagaggatgtgcgtaagtatgctgaggagcatggttatgggagtgctgaggaagctctg
cagcaaggtatggatgctatgagtgctgaatttctggctgccaagaaaactgttagtggg
gaacaacacggtgaagttggtggagaaatatatttgccagaaagctacataagctcctct
cagaattcaaggaccatatag
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