Celeribacter indicus: P73_0641
Help
Entry
P73_0641 CDS
T03575
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cid
Celeribacter indicus
Pathway
cid03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cid00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P73_0641 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cid03021
]
P73_0641 (rpoB)
03400 DNA repair and recombination proteins [BR:
cid03400
]
P73_0641 (rpoB)
Enzymes [BR:
cid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P73_0641 (rpoB)
Transcription machinery [BR:
cid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P73_0641 (rpoB)
DNA repair and recombination proteins [BR:
cid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P73_0641 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AJE45356
UniProt:
A0A0B5DX81
LinkDB
All DBs
Position
644519..648655
Genome browser
AA seq
1378 aa
AA seq
DB search
MASSFLGQKRLRKYYGKIREVLEMPNLIEVQKSSYDLFLKSGDASEPQDGEGIKGVFQSV
FPIKDFNETAVLEFVKYELEAPKYDVEECQQRDMTYSAPLKVTLRLIVFDVDEDTGAKSV
KDIKEQDVFMGDMPLMTPNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDIVYARIDRRRKLPVTTLLYALGLDQEAICDAYYDTVDYKLEK
NKGWVTRFFPERVRGTRPTYDLVDAATGEVICKAGDKMTPRAVKKILDEGSVTELLVPFD
RIVGKFVAKDIINEENGAIYVEAGDELTYEMDKDGTVVGGTLKTLLDNGITEIPVLDIDG
VNVGAYIRNTMESDKNWNRETALMDIYRVMRPGEPPTVEAASTLFDSLFFDSERYDLSAV
GRVKMNMRLDLDAPDTQRTLRREDIVACIKALVELRDGKGEVDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHITHYGRMCPIETPEGPNIGLINSLATFAR
VNKYGFIETPYRKVVDGQVTDEVSYMSATEEMRHTVAQANANLDAEGRFVNDLVSTREGG
EHALNPPANVDLIDVSPKQLVSVGAALIPFLENDDANRALMGANMQRQAVPLLRAEAPLV
GTGMEGKVAIDSGAAIQARRAGVIDQVDATRVVIRATEDLEPGDPGVDIYRLRKFQRSNQ
NTCINQRPLVKVGQEVAKGEVIADGPSTDMGELALGKNVIVAFMPWNGYNYEDSILISER
IARDDVFTSVHIEEFEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAHVEPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVKPGDYGTVVEVRVFNRHGVEK
DERSLQIEREEIERLARDRDDEMAILERNIYARLKDLILGKVAVKGPKGVRPNVTIDEDL
LGQLSKGQWWQLALEDETDAQIVEALNAQYEAQKRALEHRFEDKVEKVRRGDDLPPGVMK
MVKVFIAVKRKLQPGDKMAGRHGNKGVISRVVPMEDMPFLADGTPVDFCLNPLGVPSRMN
VGQILETHMGWASRGLGLQVDEALAEYRRSGDMTPVRDALKFVYGEEVYDEGFAPMDDDH
LIEAAGNVTRGVPIATPVFDGAKEADINDALTRAGFDTSAQSDLYDGRTGEKFSRKVTVG
MKYLLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRAKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDSEGEE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtccttccttggccagaaacggctccgcaaatactacggcaaaattcgcgaa
gttctcgaaatgccgaacctcatcgaggttcagaaatcctcctacgacctgttcctgaaa
tccggcgacgcctccgaaccgcaagacggcgaaggcatcaagggcgtgttccagtcggtc
ttcccgatcaaggatttcaacgagaccgccgtgctcgaattcgtgaaatacgagctcgag
gcgccgaaatacgacgtcgaggaatgccagcagcgcgacatgacctattcggctccgctg
aaggtcacgctgcgtctcatcgtgttcgatgtggacgaggacaccggcgcgaaatccgtg
aaggacatcaaggaacaggacgtgttcatgggcgacatgcccctgatgacgccgaacggc
acgttcatcgtgaacggcaccgaacgcgtgatcgtctcccagatgcaccgctctccgggc
gtgttcttcgatcatgacaagggcaagacccattcctcgggcaagctgctctttgcctgc
cggatcatcccctaccgcggctcctggctcgatttcgaattcgacgccaaggacatcgtc
tacgcgcgcatcgaccgtcgccgcaagctgccggtgacgacgctgctctacgcgctcggc
ctcgaccaggaggcgatctgcgatgcctattacgacaccgtcgattacaagctcgagaag
aacaaggggtgggtgacccgcttcttccccgagcgcgtgcgcggcacccgtccgacctat
gacctcgtcgatgcggccacgggcgaagtgatctgcaaggcgggcgacaagatgaccccg
cgcgcggtcaagaagatcctcgacgaaggatcggtgaccgagcttctcgtgcccttcgac
cggatcgtgggcaagttcgtcgcgaaagacatcatcaacgaggaaaacggcgcgatctat
gtcgaggcgggcgacgagctcacctatgagatggacaaggacggcaccgtcgtcggcggc
acgctcaagacgttgctcgacaacgggatcaccgagatcccggtcctcgacatcgacggc
gtgaatgtcggcgcctacatccgcaacacgatggaaagcgacaagaactggaaccgcgag
accgcgctgatggacatctatcgcgtgatgcgtccgggcgagccgccgaccgtcgaggcg
gcttccacgctgttcgacagcctgttcttcgacagcgagcgctacgacctgtcggccgtg
ggtcgcgtgaagatgaacatgcgcctcgacctcgacgcgccggacacccagcgcaccctg
cgccgggaggacatcgtcgcctgtatcaaggcgctcgtggagctgcgcgacggcaagggt
gaggtggacgacatcgaccacctcggcaaccgccgcgtccgctccgtcggcgagctgatg
gaaaaccagtatcgcgtcggcctcctgcggatggagcgcgcgatcaaggaacgcatgtcc
tcggtcgagatcgacacggtcatgccgcaggatctcatcaacgcgaaaccggccgccgcc
gcggtgcgcgaattcttcggctcctcgcagctgtcgcagttcatggaccagaccaacccg
ctgtcggaagtgacgcacaagcggcgtctctccgcgctcgggccgggtggcctgacgcgc
gagcgcgcgggcttcgaggtgcgcgacgtccatatcacccactatggccggatgtgcccg
atcgagacgccggaggggccgaacatcggtctcatcaactcgctcgcgaccttcgcgcgc
gtgaacaagtacggcttcatcgaaaccccctatcgcaaggtcgtcgacggtcaggtgacc
gacgaagtgtcctacatgtcggcgaccgaggaaatgcgtcacaccgtggcgcaggcgaac
gccaatctcgatgccgagggccggttcgtgaacgatctcgtctcgacccgcgagggtggc
gagcacgcgctgaacccgccggccaacgtggacctgatcgacgtgtcgccgaaacagctc
gtgtcggtcggcgcagcgctcatcccgttcctcgagaatgacgacgccaaccgcgccctg
atgggggcgaacatgcagcgtcaggccgtgccgctcctgcgggccgaggcgccgctcgtc
ggcaccggcatggaaggcaaggtcgcgatcgactccggcgccgccatccaggcgcgtcgg
gcaggcgtgatcgaccaggtcgacgcgacccgcgtcgtgatccgggcgaccgaggatctg
gagccgggcgatccgggcgtggacatctaccgtctgcgcaagttccagcgctcgaaccag
aacacctgcatcaaccagcgtccgctggtgaaggtgggtcaggaagtcgcgaagggcgag
gtcatcgccgacggtccgtccacggacatgggtgaactcgcgctcggcaagaacgtgatc
gtcgccttcatgccgtggaacggctacaactacgaggactcgatcctgatctccgagcgc
atcgcgcgtgacgacgtcttcacctcggtccatatcgaggaattcgaagtcgccgcccgc
gacacgaagctcgggccggaagagatcacccgcgacatcccgaacgtcggcgaggaagcc
ctgcgcaacctcgacgaggcgggcatcgtctatatcggcgcccatgtggagccgggtgac
attctcgtcggtaagatcacgccgaagggcgagagcccgatgacgccggaggaaaaactc
ctgcgcgccatcttcggcgagaaggcatccgacgtgcgggacacttcgctgcgcgtgaag
ccgggcgattacggcacggtcgtggaagtgcgcgtcttcaaccgtcacggcgtggagaag
gacgagcgcagcctccagatcgagcgtgaggaaatcgaacgtctcgcccgcgaccgcgac
gacgagatggcgatcctcgagcgcaatatctatgcccgtctgaaagacctcattctcggc
aaggtcgccgtgaagggtccgaagggcgtgcgtccgaacgtcacgatcgacgaggacctg
ctcggccagctctccaagggccagtggtggcagctcgccctcgaggacgagaccgacgcg
cagatcgtcgaggccctgaacgcgcaatacgaggcgcagaaacgggcactcgagcaccgc
ttcgaggacaaggtggagaaggtccgtcgcggcgacgacctgccgccgggcgtgatgaag
atggtcaaggtcttcatcgcggtgaagcgcaagcttcagccgggcgacaagatggccggc
cgccacgggaacaagggggtcatctcccgcgtcgttcccatggaggacatgcccttcctc
gcggacggcacaccggtcgacttctgcctcaacccgctcggcgtgccttcgcggatgaac
gtcggtcagatcctcgagacccacatgggctgggcctcgcgcggtctcggtctccaggtc
gacgaggcgctggccgaatatcgccgctccggtgacatgaccccggtccgtgacgcgctg
aaattcgtctacggtgaagaggtctacgacgaaggcttcgcgccgatggacgacgaccac
ctcatcgaggcggcgggcaatgtcacgcgcggcgtgccgatcgcgacgccggtcttcgac
ggtgcgaaagaggccgatatcaacgacgctctgacgcgggccgggttcgacacctccgcg
cagtccgacctttacgatggccgcacgggcgagaaattctcccgcaaggtcacggtgggc
atgaaatacctgctcaagctgcatcacctggtggatgacaagatccacgcccgttccacg
ggtccgtactccctcgtcacccagcagccgctcgggggcaaggcgcagttcggcggtcag
cgcttcggggagatggaggtctgggcgctcgaagcctatggggccgcctacaccttgcag
gagatgctcacggtcaagtcggacgacgtggcgggccgtgcgaaggtctacgagtcgatc
gtcaagggcgaagacaacttcgaggccggcgtgccggaatccttcaacgtgctcgtgaag
gaagtccgcggcctcggcctcaacatggaactcctggactcggagggagaggagtga
DBGET
integrated database retrieval system
