Ctenopharyngodon idella (grass carp): 127499215
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Entry
127499215 CDS
T08802
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127499215
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
127499215
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
LRR_5
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_5
Sp38
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127499215
NCBI-ProteinID:
XP_051725379
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Position
17:complement(28854315..28916573)
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AA seq
788 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQVLSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSVKRKDLANMTKLVDLTLSRNTISYITPHAFADLENLRALHLDHNRLTRIANDTFS
GMSKLHHLILNNNQLTLIHMGAFNDLLALEELDLSYNNLETIPWEAIQKMISLHTLSLDH
NMIEYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGILNPSSFALSFGGN
PLHCNCELLWLRRLNREDDLETCATPLHLSGRYFWSIPEEEFLCEPPLITRHSHEMRVLE
GQRVALKCKARGDPEPAIHWISPDGKLVSNTSRTLVYNNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELVIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDAKTSTDK
RVVMAEATSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLVNNLAAG
TQYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNSGNAAKGTSVTDVHSQTNGAQSQGCTVTPSASKQGALSLEADE
GCQKSSAAPLPPPPDSQTSETSIPDCSTSTSLVCQSWTTPGSSGSLKPKRKPAPQPVPAA
GATEPKVEALPNAETQNTNRNNSTALQQPAPTPPPPSHFKDTPILRRARPSSSKYMTLPA
EGARAKRRYSLNENLSKHHCYIGSQKLGNVFCKRSMSVNGMLVQMANSNLDSEKTVFSSS
EWILESTV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttgtctgcttgttggttatcggaatggcagtgaaggcccagatctgt
ccgaagcgctgcgtctgtcaagttctgtcccccaacctcgcaacactctgtgccaaaaaa
gggctgctctttgttccgcccaacatcgacaggcacaccgtggagctccggctagctgat
aactttgtcaccagcgtaaaacggaaagacttggccaacatgaccaagctggtggatctt
actttgtcaaggaatacaataagctacataactccacatgcgttcgcagacttggaaaac
ctacgagccttgcatttagaccacaaccgcttgacacgaatagccaacgacaccttcagt
ggcatgtctaagctgcatcacctgattctgaacaacaaccaactgaccctcatccacatg
ggagcctttaacgacctactagccctcgaagaactggacttatcctacaacaatctggag
accatcccctgggaggccattcaaaagatgatcagcctacacacacttagtctggaccac
aacatgatcgaatacattcctgaggggactttctccctcctacagaagctcaatcgctta
gacgtgacctccaacaagctccagaagcttccaccagacccgcttttccagcgggcgcag
gttctggccacatccggcattctcaatccctcctcttttgctctgagctttggaggaaat
cctttacactgcaactgcgagctgctgtggcttaggcggctcaatcgggaggacgacttg
gagacctgcgccacacccttgcatctctctggacgctatttctggtctatcccggaggag
gagttcctctgcgagccgcccctcatcacccgccactctcacgagatgagggtcctggag
ggccagcgggtagcattaaagtgcaaagccaggggagatcccgaacctgccattcactgg
atatctcccgatgggaagttagtctcaaacacgtcacgcacattggtttacaacaatggc
acgctggacatcctgataagcacagtaaaggacacaggctctttcacgtgcatttcctca
aatcctgccggggaggcccaccagaccgtggagctggttatcatcaagcttccgcacatt
agcaacagcaccaataacatccaggagcctgacccgggctcttctgacatctccacttcg
acaagggcaggagcaaacggcagcaaccacaccggcgacgccaagaccagtaccgataag
agggtggttatggcagaagccacctcatccactgcactcatcaaatttaacttccagagg
aatatacctggaatacgcatgtttcagattcagtataatggaacctatgacgactctctt
gtttacagaatgattcccccaacgagcaaaaacttcttggtgaataacctggctgccggg
acgcagtacgacctgtgtgtgctggcaatttacgacgacggcataacctccctgacggcc
acgcgggttgtaggctgcgtccagttcaccaccgagtccgagtatctgcgctgccacttc
atgcagtcccagttcttgggcggcactatgatcatcatcatcgggggcataatcgtggcc
tctgtcctcgtcttcatcatcatcctcatgatccgctacaaggtgtgcaacagcggcaat
gccgccaaggggacctcggtcaccgacgtgcactctcaaacaaacggggcgcagtcccaa
ggctgtacagtcacgccgtctgcgtccaaacaaggtgctttaagcttggaggcagatgag
ggatgccaaaagagctccgccgcgcctcttcctccacctccagattcccaaacctcagag
acctccattccagactgctccacctccacctccctggtatgccaaagctggacaacaccc
ggctcttcagggtcactaaagccaaagcgcaaaccagcgccacagcctgtccccgcagcc
ggtgccaccgagcccaaagtggaggcgttacccaacgcagagactcaaaacaccaaccga
aacaactccactgcccttcagcagccagccccaacccctccacccccgtcccactttaaa
gacactccgattttaaggagggcgcgtccgtcttcatccaagtatatgacactgcccgcc
gaaggagcacgggctaaacgcaggtactctttaaatgagaacctgtcgaaacatcactgc
tacattggctcgcagaagctggggaatgtgttttgcaagcggagtatgtccgtaaacgga
atgctagtccaaatggcaaactcaaatctagacagcgagaaaactgtgttttctagttca
gagtggattctagagagcaccgtgtga
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