Ctenopharyngodon idella (grass carp): 127499783
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Entry
127499783 CDS
T08802
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
127499783
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127499783
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127499783
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Tom5
Motif
Other DBs
NCBI-GeneID:
127499783
NCBI-ProteinID:
XP_051726331
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Position
18:complement(4252043..4313981)
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AA seq
1237 aa
AA seq
DB search
MFSWVIKVVPQPPASPGKLGEEDQTNASTAAEVTKKEDVQQDANPSKSKEEVSEENSSQN
GVLSWLSHGFNSALPQPVNASKLGNSEIKQEGNAVSNRAGMIGWIVQGLGKVVPQPDEKY
KGHTEPEEVTEVQEIKDIRDAEPLPHIPVVEVVSDEEPDAANVPFSPRVIEWIKHGFEKV
VPQSPIHLRPPAGTETLVQRAASAPVTPCKQEPAPEPTPAPAPPPAPAPAPAPAPPPTPA
APPAPASEPAPAAPEQPKVVEDSKGSNMVGWIVQGFGRMMPQPVLKPKEDSSDIVQNVCI
LQDPCDMVLEEVDSDLEAQEREQGSGQNVQAEEQVQQDSSLLQVIPNILPHVLAMQEQED
AETQTERWTPLIESIKKEAEETAIANIEERLEQERVEAARMAEDLARQAAEMAVRQLEEE
HTTQIIIDTKNEEPDNDDQSLVDVCPAEPSPHESEVSDHPPQSPPPVTTQPERSTSLPPD
ADQEEEPPEEGCGESSHLKTVPKIIVPPESESNLMAHSKVVDSELPQEQTAPGAEDEDSR
MDPNMTDLLSVGEGLERPMSAASQTSIVVNERLQDLVKLFKGRTERARDKLTDPDDSDEE
SPSASPAKKPADAPPPPPPPPEEKKDVEEAAEEEVKIYEFMGYKFPVPQLKMPQIPDWLR
VILEYRFPSSIDPYTDLIYVVWLFFVTFAWNWNVWLIPVRCTFPYQTPENVHWWLLMDYL
CDTIYILDIVVFQPRLQFVRGGDVVCDKKDMRENYMQTERFKMDVISLFPLDVLYVFTGV
KSLLRFPRLLKYNAFFEFNDRLEAVMSKAYIYRVIRTSAYLLYSLHCNACIFYWGSDYEG
LGSTKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEIVFQLVNYFVGVFAFSIMIG
QMRDVVGAATAGEAYYRQCVDSTVKYMTSYRIPREVQNRVKTWYDYTWKSQGMLDEQELL
IQLPDKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLNRLKSVVYLPGDSVCKKGEIGR
EMYIIKAGEVQVVGGPDGKTVFVTLRAGSVFGEISLLAGGGGNRRTANVKAHGFANLFIL
DKKDLADILVHYPESQKLLRKKAKKMLTKDKKPADEKVKETGEVITQRPETPKLFKAALE
VASGQTFAKLKEAYKGATLEPSTSTGPVPPPSPMHRRSPIPRPRVPDEDDMVSETTDSTM
VIRMTPRVEGEEILSVEVGPGEGVEVEEEELSKTEDK
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtgataaaagttgttccccagcctccagcgtctcctggaaaactggga
gaggaggaccagaccaatgcgtccacagcagcagaagtgacgaaaaaagaggacgtacaa
caagatgccaacccttccaagtcaaaggaggaggtctcagaggaaaacagctctcagaat
ggggttttgagttggctttctcatgggttcaacagtgctctccctcagccagtgaatgcc
tctaaactgggcaactctgaaattaagcaagagggaaatgcagtgagcaacagggctgga
atgataggatggattgtgcagggactgggaaaagtggttccacagcctgatgagaaatac
aagggtcacacagagccagaggaggtcactgaggtgcaagagatcaaagacattcgtgat
gctgagccactgcctcatattcctgtggtggaggttgtgtctgatgaggagccagacgct
gctaacgtgcccttctctcccagggtaatagaatggattaagcatggttttgagaaggta
gtccctcagtctccaatccatcttcgtcctcccgctggtacggaaacacttgtccagagg
gctgcttctgctcctgtgacaccctgcaaacaagagccagcacctgaaccaacacctgct
cctgcacctccgcctgcacctgcaccagcaccagcaccagcacctccacctacacctgca
gccccacctgcacctgcatcagaacctgcacctgcagctcctgagcaacctaaagtagtt
gaggattccaaaggctcaaatatggttggctggattgtacaggggtttggacgcatgatg
ccccaaccagtactgaaaccaaaagaggacagctctgatatcgttcaaaacgtctgcatc
ctgcaggatccgtgtgatatggtgctggaggaggtggactcagacttggaggcccaagag
agggagcagggctcggggcagaacgtccaggctgaggagcaggtgcagcaggatagctcc
ctgctgcaggtgatacccaacatcctgccacacgtgctggccatgcaggagcaggaggac
gcggagacgcagactgaacgctggacgcctcttattgagagcatcaagaaggaagcggag
gagactgccatagcaaacatagaggagagactggagcaggaacgcgtggaggcagctcgc
atggcggaggatctggcccgacaggctgcagaaatggccgtcagacagctggaggaagaa
cacaccactcagatcatcattgatacgaaaaacgaagagccagacaatgatgatcagagc
ctggtggatgtctgcccggcggagccgtcgccacacgagtctgaggtttcagatcaccca
ccccaaagtccaccgcctgtgaccactcagcctgagcgctccacatctttacctcctgat
gctgaccaggaagaggaacctcctgaagaaggatgtggagaaagcagccatttgaagacc
gttcccaaaatcatcgtcccaccagagtcagagtcaaatctgatggcccacagcaaagtt
gtggattcagaactgcctcaggagcagacggctcctggtgcggaagatgaggacagtcga
atggatccgaacatgactgatctactcagtgtgggcgaaggccttgagcggccaatgtct
gcggccagtcaaacaagtatagttgtgaatgagcgactgcaggacctggtcaagctgttt
aaggggcgaacagaacgtgcaagagataaactgactgatccagatgattctgatgaggaa
agcccttcggcatctccagccaaaaagcctgcagatgccccgcctcctccaccacctcct
ccagaggaaaagaaagacgttgaagaggcggctgaagaggaggtgaaaatctatgagttt
atgggatacaagttcccagttcctcagttgaaaatgccccagattcctgattggctgaga
gttatactggagtaccgtttcccgtccagcattgatccctacacagatttgatctacgtg
gtgtggctgttctttgtgacgtttgcgtggaactggaatgtttggctgatccctgtgcgc
tgcactttcccgtatcagacccctgagaacgttcactggtggctgctgatggactacctc
tgtgacaccatttacattcttgacatcgtggtctttcagcccaggctgcagtttgtgaga
ggaggagacgttgtgtgtgacaaaaaagacatgagagagaactacatgcaaacagagcga
tttaagatggatgtgatcagtctctttccactggatgtcctgtacgtcttcacaggtgtc
aaatcactcttgcggtttcctcgccttctaaagtacaatgcattctttgagtttaatgat
cgtctggaggctgtgatgagcaaagcatacatttacagggtgatccggacgagtgcgtac
ttgctgtactctctgcactgtaatgcctgtattttctattggggttctgactatgaagga
ctgggttctactaaatgggtctataatggcaaaggaaacagttatattcgctgctactac
tttgctgtgaagactctgatcaccatcggaggtttgcctgatcccaccactgtctttgaa
atcgtcttccaactggtcaactacttcgttggagtctttgctttctccatcatgatcggt
cagatgagagacgtagttggagccgccacagcaggtgaggcctattacagacagtgtgtg
gacagcaccgtcaaatacatgacctcctacaggatcccccgcgaggtccagaaccgagtg
aagacctggtacgactacacctggaagtcgcaaggcatgctggatgaacaggagttactt
atacagctgccagataagatgcgtctggacatcgcagcagatgtaaactacagcattgtc
agtaaagtggcgctctttcagggatgtgacagacagatgatatttgacatgctcaacagg
ctgaaatctgtggtgtaccttccaggagactctgtttgtaaaaaaggtgagatcggccga
gagatgtacatcatcaaagctggagaggtgcaggtggttggagggcctgatgggaagacg
gtgtttgtgactcttagagctggttctgtgtttggggaaattagtttgctggcaggtggt
ggtgggaaccgacgaacagctaacgtaaaggcccatggttttgctaacctcttcatcttg
gataagaaggacctggcagacatcttagtgcactaccccgagtcccagaagctactgcgc
aagaaggccaagaaaatgttgaccaaagataagaagcctgcagatgagaaggttaaagag
acgggtgaggtcatcactcagcggccagagacacccaaactcttcaaggctgccctggag
gttgcttcaggacaaacgtttgccaagttgaaggaggcatataagggagcaactctagag
ccgtcgacctccacaggtccagtgccccctccctcccccatgcaccgccgttcgcccatt
ccccggcctcgtgtaccagatgaagatgacatggtatcagagaccactgacagcaccatg
gtcatccgcatgactccccgcgttgagggagaggagatcctctccgtggaggtcggtcct
ggagagggggtggaagtggaggaggaagagctgagcaaaactgaagacaagtga
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