Ctenopharyngodon idella (grass carp): 127501582
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Entry
127501582 CDS
T08802
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127501582
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127501582
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
Motif
Other DBs
NCBI-GeneID:
127501582
NCBI-ProteinID:
XP_051729629
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All DBs
Position
1:2155443..2287551
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AA seq
1155 aa
AA seq
DB search
MSSPSAGSSGNASGDETKTSDPRISRRERQRSESPEPSAVSLKSYKSMEVPLQLSDEPVS
SDPLISRRKRSESPEPSAVSLKSYKSMEPPLQLSDEPVSSDPLISRRKRSESPEPSAVSL
KSYKSMEPPLQLSDEPVSSDPLISRRERSESPEPSAVSLKSYRSMEVPLHLSDEPVSSDP
LISRRKRSESPEPSAVSLKSYKSMEPPLQLSDEPVSSDPLRREIHELRSVPYSTYHCQTH
IRQNKTEAVLQTHTLETGDLQRVKYQHKISMKYKYERLFEGTKLQENQTLLNRIYTQLYI
TEGEREGVNEEHEVLQMEKTARTQHSQDTPIYCNDIFKTSPEPGCEEKDQIKTVLTKGIA
GIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIQDHQYSLHRLLLDFHPELQDLD
LNIYEECKVVFILDGLDESRMTLVFSDAQKVSDVTETSSVGVLMSKLIKVELLPSALIWI
TSRPAAANQIPSKYINRLTEIHGFNDPQKEDYFRKRISDEHQASRIISHIRRARSLHIMC
HIPVFCWISSTVLQKLMKEDLNAEIPQTLTEMYIHFLLIQINMRNQKYEERDPEKLLQSN
REVIVKLAEVAFKQLMKGNVMFYEEDLRESGIDATDASVYSGICTEIFKEESVIHQRKIY
SFIHLSVQEFLAAFYVFYYYVIVHVDTLQFLDVVPNLHKEVVDKALKSENGHLDLFLRFL
LGVSLESNQRLLQDLLTHTENSSESIRRTTQYIKEKIKDGHGLSTERSINLFLCLLEVKD
QTLSREIQEFVKSDKHSEKKLSPAHCSTITYMLQMSEEVLDELDLKKYNTSDEGRRRLIP
AVINCRKALLADCNLTGQHCETVSSALQSSNSVLRELDLSNNDLQDSGVKLLSDGLKNLN
CQLEILRLSGCMVTEEGCGYLSSALRSNPLHLRELDLSYNHPGQSGVQLLNDKLKDPNCS
LQILNLDHADPVRITPGLRKYACDLTLDPNTAHTQLILSDENRRAKHIKDPQSYPDHPER
FEHHEQVLCRERLNGRCYWEAELSGWAYIAVTYKGINRKGGSDSWFGYNDKSWSLYCTEN
RYSAWHSNKKTDLPAPSPQSNRVGVYVDVSAGTLSYYIVSDTHTLTHLHTFNTTFTEPLY
AGFRVFESSLSLCQI
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagttccccatctgctggatcaagcggcaatgcatccggtgatgaaaccaagacgtct
gatcccagaatcagcaggagggagagacagagatcagagtctccagaacccagcgctgtg
tctctaaagagttacaaatccatggaagtaccccttcaattaagtgatgaaccagtgtct
tctgatcctctaatcagcaggaggaagagatcagagtctccagaacccagcgctgtgtct
ctaaagagttacaaatccatggaaccaccccttcaattaagtgatgaaccagtgtcttct
gatcctctaatcagcaggaggaagagatcagagtctccagaacccagcgctgtgtctcta
aagagttacaaatccatggaaccaccccttcaattaagtgatgaaccagtgtcttctgat
cctctaatcagcaggagggagagatcagagtctccagaacccagcgctgtgtctctaaag
agttacagatccatggaagtaccccttcacttaagtgatgaaccagtgtcttctgatcct
ctaatcagtaggaggaagagatcagagtctccagaacccagcgctgtgtctctaaagagt
tacaaatccatggaaccaccccttcaattaagtgatgaaccagtgtcttctgatcctctc
aggagggagatacatgagctgagatctgtgccatactctacataccactgtcagactcac
atcaggcaaaacaaaactgaagcagtcctgcagacacacacactggagactggagacctg
cagagagtcaaataccagcacaaaatcagcatgaagtacaagtatgaaagattatttgag
ggaaccaaactacaagaaaatcaaaccctcctgaacaggatctacacccagctctacatc
acagagggagagagagaaggagtgaatgaagaacatgaggttttacagatggagaagaca
gccagaacacaacactcacaagacactccaatctactgcaatgacatctttaaaacctca
cctgaaccagggtgtgaggagaaagaccaaatcaagacagttcttactaaaggcattgct
ggaattggaaaaaccgtctctgtgcagaagttcattctggactgggctgagggaaaagcc
aatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatccaagat
catcagtacagtcttcacagacttctgctggactttcatcctgaacttcaagatctggat
ttaaatatttatgaggagtgtaaagttgtgttcatcttggatggtctggatgaaagcaga
atgacactggtgttttcagatgctcagaaagtttctgatgtgactgagacttcatcagtg
ggtgtgttgatgtcaaagctcataaaagtagagctgcttccctctgctctcatctggatc
acctccagaccagcagcagccaatcagatcccctccaaatacatcaaccgtctgacagaa
attcatggatttaatgatcctcagaaggaggactatttcaggaagagaatcagtgatgag
catcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatgtgc
cacatacccgtcttctgctggatctcatccactgtgcttcagaagctcatgaaagaagat
ctgaatgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcag
atcaacatgaggaatcagaagtatgaagagagagatccagagaaactcctgcagtccaac
agagaagtgattgtgaaacttgctgaagtggctttcaaacagctgatgaagggcaatgtg
atgttctatgaggaggacctgagagagagcggcatagacgccactgacgcctcagtgtat
tctgggatttgcactgagatctttaaggaggaatctgtgattcatcagaggaaaatctac
agcttcattcatctgagtgtccaggagtttcttgctgctttctatgtgttctactattat
gtaatagtacatgttgacacactgcagtttctggatgtagttcctaatctacataaggaa
gtagtagataaagcccttaagagtgagaatggacacctggatctgttcctgcggttcctg
ctgggtgtctcactggaatccaatcagagactcttacaggatctactgacacacacagag
aacagctcagagagcatcaggagaaccacacagtacattaaagaaaagatcaaagatgga
catggactctccactgaaagatccatcaatctgttcctctgtctgctggaagtcaaagat
cagactctgtccagagagattcaggagtttgtgaaatcagacaaacactcagagaagaaa
ctctctcctgctcactgctcaacaatcacctacatgcttcagatgtcagaggaggtgttg
gatgagctggacctcaagaaatacaacacatcagatgagggaagaagaagactgatacca
gctgtgatcaactgtaggaaagcccttcttgctgactgtaatctcactggtcaacattgt
gaaactgtgtcatcagctctacaatcctcaaactctgtcctgagagagctggacctgagt
aacaatgacctgcaagattcaggagtaaagctactttctgatggactgaagaatctaaac
tgtcagctggagatactgaggttgtctggctgtatggtgacagaggaaggctgtggttat
ctgtcttcagctctgagatcaaaccccttacacctgagagagctggatctgagctacaat
cacccaggacaatcaggagtccagctgctcaacgacaaactgaaggatccaaactgctca
ctgcagatactcaatttggatcatgcagaccctgttcgaatcacaccaggactgagaaaa
tatgcctgtgatctcacactggatccaaacaccgcacacactcaactcatcctgtcagat
gaaaacagaagggcgaaacacatcaaagatccacagtcatatcctgatcatccagagaga
tttgagcaccatgagcaggttttgtgtcgagagcgtctgaatggacgctgttactgggag
gctgaattgagtggatgggcctatatagcagtgacatataaaggaatcaacaggaaagga
ggcagtgactcttggtttggatacaatgacaaatcctggagtctgtactgcactgaaaac
agatattctgcctggcacagtaataagaaaactgacttaccagccccttcaccgcaatct
aatagagtaggagtgtatgtggacgtgtcagctggcactctgtcgtactacattgtctct
gacacacacacactcacacacttacacacatttaacaccacattcactgaacccctctat
gctggattcagggtgtttgaatcctcattgtctctgtgtcagatttaa
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