Ctenopharyngodon idella (grass carp): 127503933
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Entry
127503933 CDS
T08802
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127503933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127503933
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127503933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
127503933
NCBI-ProteinID:
XP_051734127
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Position
21:complement(30121349..30124018)
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AA seq
289 aa
AA seq
DB search
MPVSRMRMRPWLESRIDSNTIAGLVWVNKEEKMFSIPWKHAARHGWEVDKDACLFKQWAI
HTGKFREGVTTPDPKTWKANFRCAMNSLPDIEEVKDKSINKGCGAVRVYRMLPAVSKKKD
KRPKGRDSRRRVKALSSHVKKEEVHADEMQEPTIDSTILTDSPSPAMDTSDIPACEEVVG
PDSSSGLYTSRFQVSPMHSTDLEDYEAIIEISRQLERDTLLLQNGAFPKGFLANEVGTSE
SLSPQSHWSVSSGEELEFRLYTELSPEESICTYTELMNSSTITPTMCPL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtccagaatgcgcatgcgcccctggctggagagccggatcgactccaacacc
atcgctggactcgtgtgggtcaacaaggaggaaaagatgttctccatcccatggaaacac
gccgctcgtcacggctgggaggtggacaaagacgcgtgtctgttcaagcagtgggcgatc
cacacaggtaaattcagggagggagtgaccacacctgaccccaaaacctggaaagccaat
ttccgctgtgccatgaactcgctgccggacatcgaagaggtgaaggacaagagcatcaac
aaaggctgcggcgcggtgcgagtctaccgcatgctgcccgccgtgagcaagaagaaagac
aagagacccaagggtcgtgacagccggaggcgagtgaaggctctgtcttcacacgtcaag
aaggaggaagtgcacgctgacgagatgcaggagcccaccatcgacagcaccattctgaca
gactctcccagtcccgccatggacacctcagatattcccgcgtgcgaggaagtcgtcggc
ccggacagttcgagcggcctgtacaccagcaggttccaggtgtcgccgatgcattcgaca
gacttggaggattacgaagctatcattgagatttcacggcaattggaacgtgacacactg
ttgctacaaaacggtgcctttccaaaggggttcctggccaatgaagtaggcacatcagag
tctttgagtccacagagccattggagtgtaagttcaggagaggagcttgagtttcggcta
tacacagaactgagcccggaggagtctatctgcacctacacagagctgatgaacagcagc
accatcacaccgaccatgtgtcctctctga
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